Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06089 and RBAM_036700

See DNA alignment / Visit BSNT_06089 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:34
# Commandline: needle
#    -asequence pep-align/BSNT_06089___iolI.1.9828.seq
#    -bsequence pep-align/RBAM_036700___iolI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06089___iolI-RBAM_036700___iolI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06089___iolI-RBAM_036700___iolI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06089___iolI
# 2: RBAM_036700___iolI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity:     255/280 (91.1%)
# Similarity:   266/280 (95.0%)
# Gaps:           2/280 ( 0.7%)
# Score: 1337.0
# 
#
#=======================================

BSNT_06089___      1 MKLCFNEATTLENSNLKQDLELCEKHGYDYIEIRTMDKLPEYLKDHSLAD     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036700__      1 MKLCFNEATTLENSNLKQDLELCEKHGYDYIEIRTMDKLPEYLKDHSLAD     50

BSNT_06089___     51 LAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKY    100
                     |||||:||||||||||||||||||||||:.|||:|||.|||||:||||||
RBAM_036700__     51 LAEYFRTHHIKPLALNALVFFNNRDEKGYREIISEFKSMMETCRTLGVKY    100

BSNT_06089___    101 VVAVPLVTEQKIIKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCT    150
                     |||||||||:||:||||||||.:||||||||||||||.||||||||||||
RBAM_036700__    101 VVAVPLVTERKILKEEIKKSSAEVLTELSDIAEPYGVNIALEFVGHPQCT    150

BSNT_06089___    151 VNTFEQAYEIVNTVNRDNVGLVLDSFHFHAMGSNIESLKQADGKKIFIYH    200
                     ||||||||:|||.|.|||||||.|||||||||||||||||||||||||||
RBAM_036700__    151 VNTFEQAYDIVNAVGRDNVGLVFDSFHFHAMGSNIESLKQADGKKIFIYH    200

BSNT_06089___    201 IDDTEDFPIGFLTDEDRVWPGQGAIDLDAHLSALKEIGFSDVVSVELFRP    250
                     |||||||||||||||||||||||||||||||||||||||:||||||||||
RBAM_036700__    201 IDDTEDFPIGFLTDEDRVWPGQGAIDLDAHLSALKEIGFNDVVSVELFRP    250

BSNT_06089___    251 EYYKLTAEEAIQTAKKTTVDVVSKYFSM--    278
                     |||||||||.|:|||:||..||||||..  
RBAM_036700__    251 EYYKLTAEETIKTAKETTEAVVSKYFMKEA    280


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.