Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06089 and RBAM_036700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:34
# Commandline: needle
# -asequence dna-align/BSNT_06089___iolI.1.9828.seq
# -bsequence dna-align/RBAM_036700___iolI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06089___iolI-RBAM_036700___iolI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06089___iolI-RBAM_036700___iolI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06089___iolI
# 2: RBAM_036700___iolI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 847
# Identity: 709/847 (83.7%)
# Similarity: 709/847 (83.7%)
# Gaps: 14/847 ( 1.7%)
# Score: 3028.0
#
#
#=======================================
BSNT_06089___ 1 ATGAAACTTTGTTTTAATGAAGCGACAACATTGGAAAACTCAAACCTTAA 50
|||||||||||.||||||||||||||.||..||||.||.||||||.|.||
RBAM_036700__ 1 ATGAAACTTTGCTTTAATGAAGCGACTACGCTGGAGAATTCAAACTTGAA 50
BSNT_06089___ 51 ACAGGATTTAGAATTATGCGAAAAGCACGGCTATGATTATATTGAAATCC 100
||||||||||||..|.||||||||||||||||||||||||||||||||||
RBAM_036700__ 51 ACAGGATTTAGAGCTGTGCGAAAAGCACGGCTATGATTATATTGAAATCC 100
BSNT_06089___ 101 GCACAATGGATAAGCTGCCGGAGTACTTAAAAGATCATTCATTGGCAGAT 150
||||||||||||||||||||||.|||||||||||.||||||.||||.|||
RBAM_036700__ 101 GCACAATGGATAAGCTGCCGGAATACTTAAAAGACCATTCACTGGCCGAT 150
BSNT_06089___ 151 CTTGCGGAATATTTTCAAACCCATCACATCAAACCGCTTGCCTTAAACGC 200
||.|||||||||||||.||||||||||||.||||||||||||.|.|||||
RBAM_036700__ 151 CTGGCGGAATATTTTCGAACCCATCACATTAAACCGCTTGCCCTGAACGC 200
BSNT_06089___ 201 ACTCGTTTTCTTCAACAACCGTGATGAAAAGGGCCACAACGAGATCATCA 250
|||.|||||||||||||||||||||||.||||||.|.|..||||||||..
RBAM_036700__ 201 ACTGGTTTTCTTCAACAACCGTGATGAGAAGGGCTATAGGGAGATCATTT 250
BSNT_06089___ 251 CTGAATTTAAAGGCATGATGGAAACATGCAAAACCCTCGGTGTGAAATAT 300
|.|||||.|||.|||||||||||||.||||.|||||||||.||||||||.
RBAM_036700__ 251 CGGAATTCAAAAGCATGATGGAAACCTGCAGAACCCTCGGCGTGAAATAC 300
BSNT_06089___ 301 GTGGTGGCCGTTCCGCTTGTGACAGAGCAGAAGATTATAAAAGAAGAGAT 350
||.||||||||.|||||.||||||||||.|||.||..|.|||||||||||
RBAM_036700__ 301 GTAGTGGCCGTGCCGCTAGTGACAGAGCGGAAAATCTTGAAAGAAGAGAT 350
BSNT_06089___ 351 CAAAAAGAGCAGTGTAGACGTGCTGACTGAGCTGTCAGATATCGCGGAGC 400
||||||||||||.|.|||.||||||||||||||.||.||.||||||||||
RBAM_036700__ 351 CAAAAAGAGCAGCGCAGAGGTGCTGACTGAGCTTTCGGACATCGCGGAGC 400
BSNT_06089___ 401 CGTACGGCGTAAAAATAGCGCTTGAATTTGTCGGCCATCCGCAATGTACG 450
|||||||||||||.||.||.|||||||||||||||||.||||||||||||
RBAM_036700__ 401 CGTACGGCGTAAACATTGCCCTTGAATTTGTCGGCCACCCGCAATGTACG 450
BSNT_06089___ 451 GTCAATACGTTTGAACAGGCGTATGAGATCGTAAACACAGTTAACCGTGA 500
||||||||.|||||||||||||||||.|||||.|||.|.||...|||.||
RBAM_036700__ 451 GTCAATACATTTGAACAGGCGTATGACATCGTGAACGCTGTCGGCCGCGA 500
BSNT_06089___ 501 CAATGTCGGGCTTGTCCTTGACAGTTTTCACTTCCATGCAATGGGTTCAA 550
.||||||||.||.||..|||||||.||.||.|||||.||.|||||.||.|
RBAM_036700__ 501 TAATGTCGGACTGGTGTTTGACAGCTTCCATTTCCACGCGATGGGCTCCA 550
BSNT_06089___ 551 ATATTGAGAGCTTAAAGCAGGCGGACGGAAAGAAAATCTTCATCTATCAT 600
||||||||||.||.|||||||||||||||||||||||.||||||||||||
RBAM_036700__ 551 ATATTGAGAGTTTGAAGCAGGCGGACGGAAAGAAAATTTTCATCTATCAT 600
BSNT_06089___ 601 ATTGATGATACAGAAGATTTCCCAATCGGCTTTTTAACAGATGAGGATCG 650
||.||.|||||||||||.||.||.||||||||||||||.|||||.||.||
RBAM_036700__ 601 ATCGACGATACAGAAGACTTTCCGATCGGCTTTTTAACGGATGAAGACCG 650
BSNT_06089___ 651 TGTATGGCCGGGACAAGGGGCAATTGACTTAGATGCCCACTTATCAGCAC 700
.||.|||||.||.||.||.||.|||||||||||.|||||..|.|||||..
RBAM_036700__ 651 CGTCTGGCCTGGGCAGGGTGCGATTGACTTAGACGCCCATCTGTCAGCGT 700
BSNT_06089___ 701 TGAAGGAAATCGGCTTCTCTGATGTTGTTTCGGTTGAGCTCTTCCGGCCT 750
|.||.||||||||.|||..|||||||||.||.||.|||||.|||.|.|||
RBAM_036700__ 701 TAAAAGAAATCGGATTCAATGATGTTGTCTCCGTAGAGCTGTTCAGACCT 750
BSNT_06089___ 751 GAATACTATAAGCTGACTGCTGAGGAAGCCATTCAAACAGCGAAAAAAAC 800
|||||.||||||||||||||.||||||.|.||..||||.||.||..||||
RBAM_036700__ 751 GAATATTATAAGCTGACTGCGGAGGAAACGATCAAAACGGCAAAGGAAAC 800
BSNT_06089___ 801 AACAGTGGATGTCGTATCAAAATACTTCAGCATGTAA---------- 837
|||.|..|..||||||||||||||||| |||| ||
RBAM_036700__ 801 AACGGAAGCCGTCGTATCAAAATACTT---CATG-AAGGAGGCGTGA 843
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