Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_06088 and RBAM_036690

See DNA alignment / Visit BSNT_06088 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:34
# Commandline: needle
#    -asequence pep-align/BSNT_06088___fbaB.1.9828.seq
#    -bsequence pep-align/RBAM_036690___fbaB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06088___fbaB-RBAM_036690___fbaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06088___fbaB-RBAM_036690___fbaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06088___fbaB
# 2: RBAM_036690___fbaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     271/290 (93.4%)
# Similarity:   282/290 (97.2%)
# Gaps:           0/290 ( 0.0%)
# Score: 1401.0
# 
#
#=======================================

BSNT_06088___      1 MAFVSMKELLEDAKREQYAIGQFNINGLQWTKAILQAAQKEQSPVIAAAS     50
                     ||||:||.||.:||||.||:||||||||||||||||||||||||||||||
RBAM_036690__      1 MAFVTMKHLLAEAKREHYAVGQFNINGLQWTKAILQAAQKEQSPVIAAAS     50

BSNT_06088___     51 DRLVDYLGGFKTIAAMVGALIEDMAITVPVVLHLDHGSSAERCKQAIDAG    100
                     |||||||||||||:||||||:|:||||||||||||||||||||:||||||
RBAM_036690__     51 DRLVDYLGGFKTISAMVGALMEEMAITVPVVLHLDHGSSAERCRQAIDAG    100

BSNT_06088___    101 FSSVMIDGSHQPIDENIAMTKEVTDYAAKHGVSVEAEVGTVGGMEDGLVG    150
                     ||||||||||.||||||||||||.||||||||||||||||||||||||||
RBAM_036690__    101 FSSVMIDGSHHPIDENIAMTKEVADYAAKHGVSVEAEVGTVGGMEDGLVG    150

BSNT_06088___    151 GVRYADITECERIVKETNIDALAAALGSVHGKYQGEPNLGFKEMEAISRM    200
                     ||||||:.||||||||||||||||||||||||||||||||||||||||||
RBAM_036690__    151 GVRYADVAECERIVKETNIDALAAALGSVHGKYQGEPNLGFKEMEAISRM    200

BSNT_06088___    201 TDIPLVLHGASGIPQDQIKKAITLGHAKININTECMVAWTDETRRMFQEN    250
                     |||||||||||||||:||||||||||||||||||||||||||||||||:|
RBAM_036690__    201 TDIPLVLHGASGIPQEQIKKAITLGHAKININTECMVAWTDETRRMFQKN    250

BSNT_06088___    251 SDLYEPRGYLTPGIEAVEETVRSKMREFGSAGKAAKQQVG    290
                     .||||||||:||||||||||||||||||||||||.|||||
RBAM_036690__    251 GDLYEPRGYMTPGIEAVEETVRSKMREFGSAGKAVKQQVG    290


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.