Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06088 and RBAM_036690

See Amino acid alignment / Visit BSNT_06088 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:34
# Commandline: needle
#    -asequence dna-align/BSNT_06088___fbaB.1.9828.seq
#    -bsequence dna-align/RBAM_036690___fbaB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06088___fbaB-RBAM_036690___fbaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06088___fbaB-RBAM_036690___fbaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06088___fbaB
# 2: RBAM_036690___fbaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 873
# Identity:     806/873 (92.3%)
# Similarity:   806/873 (92.3%)
# Gaps:           0/873 ( 0.0%)
# Score: 3762.0
# 
#
#=======================================

BSNT_06088___      1 ATGGCTTTTGTATCGATGAAAGAGCTTCTTGAAGATGCAAAGCGGGAGCA     50
                     |||||||||||..|.||||||.|.|||||||.|||.||.||.||||||||
RBAM_036690__      1 ATGGCTTTTGTCACCATGAAACATCTTCTTGCAGAAGCGAAACGGGAGCA     50

BSNT_06088___     51 ATATGCAATTGGCCAGTTTAATATCAACGGCCTGCAATGGACGAAGGCGA    100
                     .||||||.|.|||||.|||||||||||||||||.||||||||||||||||
RBAM_036690__     51 TTATGCAGTCGGCCAATTTAATATCAACGGCCTCCAATGGACGAAGGCGA    100

BSNT_06088___    101 TTTTGCAGGCGGCGCAAAAGGAGCAATCACCAGTCATCGCCGCGGCTTCC    150
                     ||.|||||||||||||||||||||||||.||.||||||||||||||||||
RBAM_036690__    101 TTCTGCAGGCGGCGCAAAAGGAGCAATCGCCGGTCATCGCCGCGGCTTCC    150

BSNT_06088___    151 GATCGCCTGGTCGACTATTTAGGCGGATTTAAAACGATTGCCGCCATGGT    200
                     |||||.||||||||||||||||||||.||||||||||||.||||||||||
RBAM_036690__    151 GATCGTCTGGTCGACTATTTAGGCGGCTTTAAAACGATTTCCGCCATGGT    200

BSNT_06088___    201 CGGCGCGTTAATAGAGGACATGGCGATTACCGTTCCGGTCGTGCTTCATC    250
                     ||||||||||||.||.||.|||||||||||||||||.||||||||.||||
RBAM_036690__    201 CGGCGCGTTAATGGAAGAAATGGCGATTACCGTTCCCGTCGTGCTCCATC    250

BSNT_06088___    251 TCGATCACGGCAGCAGTGCGGAACGCTGCAAACAGGCCATTGATGCCGGA    300
                     |.||||||||.|||||||||||||||||||.||||||||||||.||||||
RBAM_036690__    251 TTGATCACGGGAGCAGTGCGGAACGCTGCAGACAGGCCATTGACGCCGGA    300

BSNT_06088___    301 TTCAGCTCAGTGATGATTGACGGCTCCCATCAGCCGATTGACGAGAATAT    350
                     ||||||||||||||||||||||||||||||||.||||||||.|||||.||
RBAM_036690__    301 TTCAGCTCAGTGATGATTGACGGCTCCCATCATCCGATTGATGAGAACAT    350

BSNT_06088___    351 CGCGATGACAAAAGAAGTCACCGATTATGCCGCAAAACACGGCGTGTCAG    400
                     |||||||||||||||||||.|||||||||||||.||.||||||||.||||
RBAM_036690__    351 CGCGATGACAAAAGAAGTCGCCGATTATGCCGCTAAGCACGGCGTCTCAG    400

BSNT_06088___    401 TAGAAGCCGAAGTCGGCACGGTCGGCGGAATGGAAGACGGACTGGTCGGC    450
                     |||||||.||||||||||||||||||||.|||||||||||.|||||||||
RBAM_036690__    401 TAGAAGCAGAAGTCGGCACGGTCGGCGGTATGGAAGACGGGCTGGTCGGC    450

BSNT_06088___    451 GGGGTCCGCTATGCGGATATCACGGAATGTGAGCGGATCGTTAAAGAAAC    500
                     ||||||||||||||.|||.||.|.|||||||||||||||||.||||||||
RBAM_036690__    451 GGGGTCCGCTATGCCGATGTCGCCGAATGTGAGCGGATCGTCAAAGAAAC    500

BSNT_06088___    501 CAATATCGACGCGCTGGCCGCCGCCCTCGGCTCTGTACACGGCAAATATC    550
                     |||||||||||||||||||||||||||||||||.||.|||||||||||||
RBAM_036690__    501 CAATATCGACGCGCTGGCCGCCGCCCTCGGCTCCGTCCACGGCAAATATC    550

BSNT_06088___    551 AGGGTGAGCCGAATCTCGGATTTAAGGAAATGGAGGCTATCTCCCGCATG    600
                     |.|||||.|||||||||||||||||.||||||||||||||||||||||||
RBAM_036690__    551 AAGGTGAACCGAATCTCGGATTTAAAGAAATGGAGGCTATCTCCCGCATG    600

BSNT_06088___    601 ACTGATATTCCCCTCGTTCTTCACGGGGCATCCGGGATTCCGCAGGATCA    650
                     |||||||||||.||||||||||||||.||||||||||||||||||||.||
RBAM_036690__    601 ACTGATATTCCTCTCGTTCTTCACGGAGCATCCGGGATTCCGCAGGAACA    650

BSNT_06088___    651 GATCAAAAAAGCTATCACGCTCGGCCACGCGAAGATCAATATCAATACGG    700
                     ||||||||||||.||||||||||||||||||||.|||||||||||.||||
RBAM_036690__    651 GATCAAAAAAGCCATCACGCTCGGCCACGCGAAAATCAATATCAACACGG    700

BSNT_06088___    701 AATGTATGGTAGCGTGGACAGACGAAACACGCCGCATGTTTCAGGAAAAC    750
                     ||||||||||.||.||||||||||||||||||||||||||||||.|||||
RBAM_036690__    701 AATGTATGGTCGCCTGGACAGACGAAACACGCCGCATGTTTCAGAAAAAC    750

BSNT_06088___    751 AGCGATCTGTACGAACCGCGCGGCTATTTGACACCCGGCATTGAAGCCGT    800
                     .|.|||||||||||||||||||||||..||||||||||||||||||||||
RBAM_036690__    751 GGTGATCTGTACGAACCGCGCGGCTACATGACACCCGGCATTGAAGCCGT    800

BSNT_06088___    801 GGAAGAGACAGTGCGAAGCAAAATGAGAGAGTTCGGATCAGCCGGTAAAG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036690__    801 GGAAGAGACAGTGCGAAGCAAAATGAGAGAGTTCGGATCAGCCGGTAAAG    850

BSNT_06088___    851 CAGCTAAGCAGCAGGTCGGCTAA    873
                     |.|..||.|||||||||||||.|
RBAM_036690__    851 CTGTAAAACAGCAGGTCGGCTGA    873


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