Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06085 and RBAM_036620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:34
# Commandline: needle
# -asequence pep-align/BSNT_06085___yxdK.1.9828.seq
# -bsequence pep-align/RBAM_036620___yxdK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06085___yxdK-RBAM_036620___yxdK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06085___yxdK-RBAM_036620___yxdK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06085___yxdK
# 2: RBAM_036620___yxdK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 325
# Identity: 307/325 (94.5%)
# Similarity: 313/325 (96.3%)
# Gaps: 9/325 ( 2.8%)
# Score: 1599.0
#
#
#=======================================
BSNT_06085___ 1 MKLFLRSHAVLILLFLLQGLFVFFYYWFAGLHSFSHLFYILGVQLLILAG 50
:||||||||||||||||||||||||||||||||||||||||
RBAM_036620__ 1 ---------MLILLFLLQGLFVFFYYWFAGLHSFSHLFYILGVQLLILAG 41
BSNT_06085___ 51 YLAYRWYKDRGVYHWLSSGQEGTDIPYLGSSVFCSKLYEKQMELIRMQHQ 100
||||||||||||||||||.||||||||||||||||:||||||||||||||
RBAM_036620__ 42 YLAYRWYKDRGVYHWLSSEQEGTDIPYLGSSVFCSELYEKQMELIRMQHQ 91
BSNT_06085___ 101 KLHETEAKLDARVTYMNQWVHQVKTPLSVINLIIQEEDEPVFEQIKKEVR 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036620__ 92 KLHETEAKLDARVTYMNQWVHQVKTPLSVINLIIQEEDEPVFEQIKKEVR 141
BSNT_06085___ 151 QIEFGLETLLYSSRLDLFERDFKIEAVSLSELLQSVIQSYKRFFIQYRVY 200
|||||||||||||||||||||||:||||||||||||||||||||||||||
RBAM_036620__ 142 QIEFGLETLLYSSRLDLFERDFKVEAVSLSELLQSVIQSYKRFFIQYRVY 191
BSNT_06085___ 201 PKMNVCDDHQIYTDAKWLKFAIGQVVTNAVKYSAGKSDRLELNVFRDEDR 250
|||::.||||||||||||||||||||||||||||||||||||||||||||
RBAM_036620__ 192 PKMDIRDDHQIYTDAKWLKFAIGQVVTNAVKYSAGKSDRLELNVFRDEDR 241
BSNT_06085___ 251 TVLEVKDYGVGIPSQDIKRVFDPYYTGENGQRFQESTGIGLHLVKEITDK 300
||||||||||||||||||||||||||||||:|||||||||||||||||.|
RBAM_036620__ 242 TVLEVKDYGVGIPSQDIKRVFDPYYTGENGRRFQESTGIGLHLVKEITGK 291
BSNT_06085___ 301 LNHTVDISSSPGEGTSVRFSFLTKM 325
|||||||||||||||||||||||||
RBAM_036620__ 292 LNHTVDISSSPGEGTSVRFSFLTKM 316
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