Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06085 and RBAM_036620

See Amino acid alignment / Visit BSNT_06085 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:34
# Commandline: needle
#    -asequence dna-align/BSNT_06085___yxdK.1.9828.seq
#    -bsequence dna-align/RBAM_036620___yxdK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06085___yxdK-RBAM_036620___yxdK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06085___yxdK-RBAM_036620___yxdK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06085___yxdK
# 2: RBAM_036620___yxdK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 978
# Identity:     910/978 (93.0%)
# Similarity:   910/978 (93.0%)
# Gaps:          27/978 ( 2.8%)
# Score: 4386.0
# 
#
#=======================================

BSNT_06085___      1 ATGAAGCTGTTTCTCCGGTCTCATGCAGTGCTGATTCTGCTTTTTCTCCT     50
                                                |||||||||||||||||||||||
RBAM_036620__      1 ---------------------------GTGCTGATTCTGCTTTTTCTCCT     23

BSNT_06085___     51 TCAAGGACTGTTTGTCTTCTTTTATTACTGGTTTGCGGGTCTTCATTCTT    100
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
RBAM_036620__     24 TCAAGGGCTGTTTGTCTTCTTTTATTACTGGTTTGCGGGTCTTCATTCTT     73

BSNT_06085___    101 TTTCTCACCTGTTTTACATATTGGGCGTGCAGCTTCTTATTTTGGCGGGC    150
                     ||||.||||||||||||||||||||||||||||||||||||||||||||.
RBAM_036620__     74 TTTCCCACCTGTTTTACATATTGGGCGTGCAGCTTCTTATTTTGGCGGGA    123

BSNT_06085___    151 TATCTTGCCTATCGCTGGTACAAAGACCGCGGCGTGTATCATTGGCTCAG    200
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
RBAM_036620__    124 TATCTTGCCTATCGCTGGTACAAAGACCGCGGTGTGTATCATTGGCTCAG    173

BSNT_06085___    201 CTCGGGGCAGGAAGGGACGGATATCCCGTATCTCGGTTCTTCAGTGTTCT    250
                     |||||.|||||||||||||||.||||||||||||||||||||||||||.|
RBAM_036620__    174 CTCGGAGCAGGAAGGGACGGACATCCCGTATCTCGGTTCTTCAGTGTTTT    223

BSNT_06085___    251 GTTCAAAGCTGTATGAAAAGCAGATGGAGCTGATCCGGATGCAGCACCAG    300
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
RBAM_036620__    224 GTTCAGAGCTGTATGAAAAGCAGATGGAGCTGATCCGGATGCAGCACCAG    273

BSNT_06085___    301 AAGCTCCATGAGACCGAAGCCAAGCTTGACGCGCGGGTGACGTATATGAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036620__    274 AAGCTCCATGAGACCGAAGCCAAGCTTGACGCGCGGGTGACGTATATGAA    323

BSNT_06085___    351 TCAATGGGTGCACCAAGTAAAGACGCCGCTGTCGGTCATTAATTTAATCA    400
                     .||||||||||||||||||||.||||||||||||||||||||||||||||
RBAM_036620__    324 CCAATGGGTGCACCAAGTAAAAACGCCGCTGTCGGTCATTAATTTAATCA    373

BSNT_06085___    401 TTCAAGAAGAGGATGAGCCCGTTTTTGAACAAATCAAAAAAGAAGTCCGG    450
                     ||||.|||||||||||||||||.||||||||||||||||||||.||||||
RBAM_036620__    374 TTCAGGAAGAGGATGAGCCCGTCTTTGAACAAATCAAAAAAGAGGTCCGG    423

BSNT_06085___    451 CAGATTGAATTCGGGCTGGAGACGCTTCTTTATTCTTCAAGGCTTGACCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036620__    424 CAGATTGAATTCGGGCTGGAGACGCTTCTTTATTCTTCAAGGCTTGACCT    473

BSNT_06085___    501 GTTTGAACGGGATTTTAAAATCGAAGCGGTTTCCCTATCCGAGCTTCTCC    550
                     ||||||.||||||||||||.|.|||||||||||..||||.||||||||||
RBAM_036620__    474 GTTTGAGCGGGATTTTAAAGTTGAAGCGGTTTCTTTATCAGAGCTTCTCC    523

BSNT_06085___    551 AATCAGTCATTCAAAGCTATAAACGATTTTTTATTCAATATCGCGTTTAT    600
                     ||||||||||||||||||||||||||||||||||||||||.||.||.|||
RBAM_036620__    524 AATCAGTCATTCAAAGCTATAAACGATTTTTTATTCAATACCGGGTCTAT    573

BSNT_06085___    601 CCGAAAATGAACGTTTGCGATGATCATCAGATTTACACCGATGCCAAATG    650
                     |||||||||.|..||.||||||||||||||||||||||||||||||||||
RBAM_036620__    574 CCGAAAATGGATATTCGCGATGATCATCAGATTTACACCGATGCCAAATG    623

BSNT_06085___    651 GCTCAAATTTGCGATCGGCCAAGTGGTCACAAATGCGGTCAAGTATTCAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
RBAM_036620__    624 GCTCAAATTTGCGATCGGCCAAGTGGTCACAAATGCGGTCAAGTATTCGG    673

BSNT_06085___    701 CGGGCAAGAGTGACAGACTTGAGCTGAATGTCTTCCGCGATGAAGACAGG    750
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036620__    674 CAGGCAAGAGTGACAGACTTGAGCTGAATGTCTTCCGCGATGAAGACAGG    723

BSNT_06085___    751 ACGGTGCTTGAAGTCAAAGATTACGGTGTCGGGATTCCCTCGCAAGACAT    800
                     ||||||||||||||||||||||||||||||||.||||||||||||||.||
RBAM_036620__    724 ACGGTGCTTGAAGTCAAAGATTACGGTGTCGGCATTCCCTCGCAAGATAT    773

BSNT_06085___    801 CAAGCGGGTGTTTGACCCTTATTACACCGGTGAAAACGGGCAGCGTTTCC    850
                     ||||||||||||||||||||||||||||||.||||||||.|.||||||||
RBAM_036620__    774 CAAGCGGGTGTTTGACCCTTATTACACCGGCGAAAACGGACGGCGTTTCC    823

BSNT_06085___    851 AAGAATCTACGGGAATCGGCCTCCATCTCGTCAAAGAAATTACAGATAAG    900
                     |||||||||||||||||||||||||||||||||||||||||||.|..|||
RBAM_036620__    824 AAGAATCTACGGGAATCGGCCTCCATCTCGTCAAAGAAATTACGGGCAAG    873

BSNT_06085___    901 CTCAATCATACGGTAGACATCAGCTCGTCTCCCGGTGAAGGGACATCAGT    950
                     ||||||||||||||.||||||||||||||.|||||||||||||||||.||
RBAM_036620__    874 CTCAATCATACGGTGGACATCAGCTCGTCCCCCGGTGAAGGGACATCGGT    923

BSNT_06085___    951 TCGATTTTCATTTCTTACAAAAATGTAA    978
                     .|||||||||||.|||||||||||||||
RBAM_036620__    924 CCGATTTTCATTCCTTACAAAAATGTAA    951


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_06085 and RBAM_036620

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
