Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06079 and RBAM_036610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:34
# Commandline: needle
# -asequence pep-align/BSNT_06079.1.9828.seq
# -bsequence pep-align/RBAM_036610___yxdL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06079-RBAM_036610___yxdL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06079-RBAM_036610___yxdL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06079
# 2: RBAM_036610___yxdL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity: 134/257 (52.1%)
# Similarity: 136/257 (52.9%)
# Gaps: 119/257 (46.3%)
# Score: 672.0
#
#
#=======================================
BSNT_06079 0 -------------------------------------------------- 0
RBAM_036610__ 1 MANMLEVKHINKTYKGQVSYQALKQISFSIEEGGFTAVMGPSGSGKTTLL 50
BSNT_06079 0 -------------------------------------------------- 0
RBAM_036610__ 51 NIISTIDRPDSGDILIHGENPHRLKRTKLAHFRRKQLGFVFQDFNLLDTL 100
BSNT_06079 1 -------------------MEEKLQGIAAKLGIENLLNKRTFEVSGGQRQ 31
|||||.|||||||||:|||||||||||||||
RBAM_036610__ 101 TIGENIMLPLTLEKEAPSVMEEKLHGIAAKLGIEDLLNKRTFEVSGGQRQ 150
BSNT_06079 32 RAAIARAVIHKPSLILADEPTGNLDSKASKDVMETMQSLNQDDHVTALMD 81
||||||||||||||||||||||||||||||||||||||||||||:||||.
RBAM_036610__ 151 RAAIARAVIHKPSLILADEPTGNLDSKASKDVMETMQSLNQDDHITALMV 200
BSNT_06079 82 THDPVAASYCRRVIFIKDGELFNEIYRGENRQVFYEQILDVLSMLGGNAN 131
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036610__ 201 THDPVAASYCRRVIFIKDGELFNEIYRGENRQVFYEQILDVLSMLGGNAN 250
BSNT_06079 132 DLSSVRL 138
|||||||
RBAM_036610__ 251 DLSSVRL 257
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