Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06079 and RBAM_036610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:34
# Commandline: needle
# -asequence dna-align/BSNT_06079.1.9828.seq
# -bsequence dna-align/RBAM_036610___yxdL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06079-RBAM_036610___yxdL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06079-RBAM_036610___yxdL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06079
# 2: RBAM_036610___yxdL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 774
# Identity: 402/774 (51.9%)
# Similarity: 402/774 (51.9%)
# Gaps: 357/774 (46.1%)
# Score: 1950.0
#
#
#=======================================
BSNT_06079 0 -------------------------------------------------- 0
RBAM_036610__ 1 ATGGCGAATATGCTTGAAGTCAAACATATAAATAAAACCTATAAAGGACA 50
BSNT_06079 0 -------------------------------------------------- 0
RBAM_036610__ 51 AGTGTCCTATCAAGCTTTAAAACAAATTTCGTTTTCAATAGAAGAAGGCG 100
BSNT_06079 0 -------------------------------------------------- 0
RBAM_036610__ 101 GGTTCACGGCGGTGATGGGACCGTCCGGCTCCGGAAAAACAACGCTTTTG 150
BSNT_06079 0 -------------------------------------------------- 0
RBAM_036610__ 151 AATATCATTTCAACGATCGACCGGCCGGATTCAGGCGATATCCTGATTCA 200
BSNT_06079 0 -------------------------------------------------- 0
RBAM_036610__ 201 CGGAGAAAACCCGCACCGGCTGAAGCGGACAAAGCTCGCTCATTTCCGCC 250
BSNT_06079 0 -------------------------------------------------- 0
RBAM_036610__ 251 GCAAGCAGCTCGGATTTGTGTTTCAGGATTTCAACCTTCTGGACACGCTG 300
BSNT_06079 0 -------------------------------------------------- 0
RBAM_036610__ 301 ACGATCGGTGAAAATATCATGCTGCCGTTAACGCTTGAAAAAGAAGCGCC 350
BSNT_06079 1 -------ATGGAAGAAAAACTGCAAGGCATCGCGGCAAAGCTCGGAATCG 43
|||||||||||||||||.|||||||||||||||||||||||||
RBAM_036610__ 351 GTCTGTCATGGAAGAAAAACTGCACGGCATCGCGGCAAAGCTCGGAATCG 400
BSNT_06079 44 AAAACCTGCTCAACAAACGGACGTTTGAAGTATCCGGAGGACAGCGCCAG 93
||.||||||||||||||||||||||||||||||||||.||||||||||||
RBAM_036610__ 401 AAGACCTGCTCAACAAACGGACGTTTGAAGTATCCGGCGGACAGCGCCAG 450
BSNT_06079 94 CGTGCCGCCATCGCAAGAGCGGTCATTCATAAGCCGTCACTCATCCTGGC 143
||.|||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_036610__ 451 CGGGCCGCCATCGCAAGAGCGGTCATTCATAAGCCGTCACTCATTCTGGC 500
BSNT_06079 144 CGATGAACCGACGGGCAACCTTGATTCCAAAGCGTCAAAAGACGTCATGG 193
|||||||||||||||.||||||||||||||||||||||||||||||||||
RBAM_036610__ 501 CGATGAACCGACGGGAAACCTTGATTCCAAAGCGTCAAAAGACGTCATGG 550
BSNT_06079 194 AAACGATGCAGAGCCTGAATCAGGATGATCATGTCACGGCTTTGATGGAT 243
|||||||||||||||||||.||||||||||||.|||||||||||||||..
RBAM_036610__ 551 AAACGATGCAGAGCCTGAACCAGGATGATCATATCACGGCTTTGATGGTG 600
BSNT_06079 244 ACCCACGATCCTGTTGCGGCAAGCTACTGCCGCCGCGTCATCTTTATAAA 293
|||||||||||.||||||||||||||||||||||||||||||||||||||
RBAM_036610__ 601 ACCCACGATCCGGTTGCGGCAAGCTACTGCCGCCGCGTCATCTTTATAAA 650
BSNT_06079 294 AGACGGCGAACTATTTAATGAGATTTACCGCGGGGAAAACCGCCAAGTCT 343
||||||||||||.|||||||||||||||||||||||||||||||||||||
RBAM_036610__ 651 AGACGGCGAACTGTTTAATGAGATTTACCGCGGGGAAAACCGCCAAGTCT 700
BSNT_06079 344 TTTATGAACAAATTCTCGATGTGCTGTCTATGCTGGGGGGAAACGCAAAT 393
|||||||.||.|||||.|||||||||||||||||||||||||||||||||
RBAM_036610__ 701 TTTATGAGCAGATTCTTGATGTGCTGTCTATGCTGGGGGGAAACGCAAAT 750
BSNT_06079 394 GACCTTTCTTCAGTTCGCTTATAA 417
||||||||||||||||||||||||
RBAM_036610__ 751 GACCTTTCTTCAGTTCGCTTATAA 774
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