Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06073 and RBAM_036550

See DNA alignment / Visit BSNT_06073 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:33
# Commandline: needle
#    -asequence pep-align/BSNT_06073___yxeC.1.9828.seq
#    -bsequence pep-align/RBAM_036550___yxeC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06073___yxeC-RBAM_036550___yxeC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06073___yxeC-RBAM_036550___yxeC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06073___yxeC
# 2: RBAM_036550___yxeC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 134
# Identity:      44/134 (32.8%)
# Similarity:    57/134 (42.5%)
# Gaps:          50/134 (37.3%)
# Score: 205.0
# 
#
#=======================================

BSNT_06073___      1 MGITKRGAAWEWLHSWWMLFIFMPFAITSFFAFLFIGIKVRNRKWIMYGI     50
                                                                   |..|
RBAM_036550__      1 ----------------------------------------------MAEI      4

BSNT_06073___     51 --IYFFIFAFGFVLSDLPGVFIVVPLWAVTIIHGFKVRPLYLIQLDVYKD     98
                       .||.|.|..|||...|||:||:|||.::||||.|||..|||||||:|.
RBAM_036550__      5 RTYYFIILAIAFVLPSTPGVYIVLPLWVISIIHGLKVRAAYLIQLDVFKQ     54

BSNT_06073___     99 HVEARAFAEARSEAESRFHAPKQSIQDIHIRKEQ    132
                     :|||||:...|.|||::|..  :....|.:.|::
RBAM_036550__     55 NVEARAYEAVRHEAEAKFGG--KPAHRIDLTKQR     86


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