Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06068 and RBAM_036520

See DNA alignment / Visit BSNT_06068 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:33
# Commandline: needle
#    -asequence pep-align/BSNT_06068___yxeF.1.9828.seq
#    -bsequence pep-align/RBAM_036520___yxeF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06068___yxeF-RBAM_036520___yxeF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06068___yxeF-RBAM_036520___yxeF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06068___yxeF
# 2: RBAM_036520___yxeF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:      82/149 (55.0%)
# Similarity:   107/149 (71.8%)
# Gaps:          16/149 (10.7%)
# Score: 415.5
# 
#
#=======================================

BSNT_06068___      1 MVIPLRNKYGILFLIAV----CIMVSGCQQQK-EETPFYYGTWDEGRAPG     45
                         :||..  :|::.|    |:|::||.|:| :|.||||||||.|..||
RBAM_036520__      1 ----MRNIR--IFIMTVLVFGCVMITGCSQKKADEPPFYYGTWDAGLKPG     44

BSNT_06068___     46 PTDGVKSATVTFTEDEVVETEVVEGRGEVQLPFMAYKVISQSTDGSIEIQ     95
                     |.|||:|.|||||:|.|:..:|::|||||.:|...||||||:|||:|||:
RBAM_036520__     45 PMDGVRSETVTFTKDSVLTKQVIQGRGEVAMPSDVYKVISQNTDGTIEIE     94

BSNT_06068___     96 YLGPYYPLKSTLKRGENGTLIWEQNGQRKTMTRIESKTGREEKDEKSKS    144
                     |||..:|:|||||||:|.||||:..|:.||||||  |||.|:..||   
RBAM_036520__     95 YLGHPHPVKSTLKRGKNDTLIWKIYGETKTMTRI--KTGGEDAHEK---    138


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