Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06065 and RBAM_036500

See DNA alignment / Visit BSNT_06065 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:33
# Commandline: needle
#    -asequence pep-align/BSNT_06065___yxeH.1.9828.seq
#    -bsequence pep-align/RBAM_036500___yxeH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06065___yxeH-RBAM_036500___yxeH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06065___yxeH-RBAM_036500___yxeH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06065___yxeH
# 2: RBAM_036500___yxeH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     210/270 (77.8%)
# Similarity:   241/270 (89.3%)
# Gaps:           0/270 ( 0.0%)
# Score: 1112.0
# 
#
#=======================================

BSNT_06065___      1 MYKLIAIDMDGTLLNDHHEVTEEVRDALHAAKAEGVKIVLCTGRPIGGVQ     50
                     |||||||||||||||||||||.|||.||.|||||||.||||||||||||:
RBAM_036500__      1 MYKLIAIDMDGTLLNDHHEVTAEVRGALDAAKAEGVNIVLCTGRPIGGVR     50

BSNT_06065___     51 RYLDELNLIEEGDYVIAYNGALVQNTHTNEVVSELSLGYDDLTSLYDLSL    100
                     |||:||||.||||:||||||||||||:||.||:|.|||::||.|||:|||
RBAM_036500__     51 RYLEELNLQEEGDFVIAYNGALVQNTYTNGVVAEQSLGFEDLKSLYELSL    100

BSNT_06065___    101 ELKTPMHFFDSSNLYTPNRDISEFTVYESYVTQVPLHFRKIDEVPKDILI    150
                     :|.||||:||::|||||||||||:||||||:|:||||||.||||||||||
RBAM_036500__    101 QLDTPMHYFDTANLYTPNRDISEYTVYESYITKVPLHFRTIDEVPKDILI    150

BSNT_06065___    151 PKVMFIDKPENLSRVITSIPKDVREKYTMVRSAPFFYEILHSEASKGNAV    200
                     |||||||.|:.|.:.|.|||:..:|.||||:|||||:||||.:.||||||
RBAM_036500__    151 PKVMFIDDPDKLEKAIASIPESFKETYTMVKSAPFFHEILHPKVSKGNAV    200

BSNT_06065___    201 RQLAQLLGIEQTEVMCIGDNGNDLTMIEWAGCGVAMANAIPEVLEAANFQ    250
                     :.|.:.|||||.:||.|||||||::||:|||||||||||||||.|.|:|:
RBAM_036500__    201 KLLVEKLGIEQKDVMAIGDNGNDMSMIQWAGCGVAMANAIPEVREIADFE    250

BSNT_06065___    251 TRSNNEHGVAHAIHELVLAK    270
                     |:|||||||||||.||||.|
RBAM_036500__    251 TKSNNEHGVAHAIQELVLKK    270


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