Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06049 and RBAM_036490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:32
# Commandline: needle
# -asequence pep-align/BSNT_06049___deoR.1.9828.seq
# -bsequence pep-align/RBAM_036490___deoR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06049___deoR-RBAM_036490___deoR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06049___deoR-RBAM_036490___deoR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06049___deoR
# 2: RBAM_036490___deoR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 313
# Identity: 262/313 (83.7%)
# Similarity: 289/313 (92.3%)
# Gaps: 0/313 ( 0.0%)
# Score: 1356.0
#
#
#=======================================
BSNT_06049___ 1 MDREKQQLSIEAARLYYQSDYSQQQIAEQLNISRPTVSRLLQYAKEKGYV 50
|||||||||||||:||||||||||||||:|::||||||||||||||||||
RBAM_036490__ 1 MDREKQQLSIEAAKLYYQSDYSQQQIAERLDLSRPTVSRLLQYAKEKGYV 50
BSNT_06049___ 51 QIRVMDPFEDLDALGSILEEKYGLLEAHVVFSPTPDYAGITHDLSRYGAE 100
||||||||||||.||:.||||||||||||||||:.||..|||.||||||:
RBAM_036490__ 51 QIRVMDPFEDLDELGAKLEEKYGLLEAHVVFSPSDDYQAITHYLSRYGAD 100
BSNT_06049___ 101 YMHETVKDGDIVGVSWGTTMYQIAQNMQPKQVKGVEVVQLKGGISHSRVS 150
|||:|||||||:||||||||||||..|:|||||.|||||||||||||.|:
RBAM_036490__ 101 YMHKTVKDGDILGVSWGTTMYQIASRMEPKQVKSVEVVQLKGGISHSNVN 150
BSNT_06049___ 151 TYSAETIQLFAEAFQTMPRYLPLPVVFDNADVKRMVEKDRHIERIIEMGK 200
|||:|||||||||||||||||||||:||:||||:|||:||||:||||||:
RBAM_036490__ 151 TYSSETIQLFAEAFQTMPRYLPLPVIFDSADVKQMVERDRHIKRIIEMGR 200
BSNT_06049___ 201 QANIALFTVGTVRDEALLFRLGYFNEEEKALLKKQAVGDICSRFFDAKGN 250
||||||||||||||||||||||||.||||.|||.:.||||||||||.:|.
RBAM_036490__ 201 QANIALFTVGTVRDEALLFRLGYFREEEKQLLKARGVGDICSRFFDEEGR 250
BSNT_06049___ 251 ICSSAINDRTIGVELEDLRLKERSILVAGGSRKVSSIHGALTGKYANVLI 300
||||:||.|||||||.||::|||||||||||||..:|||||.||||||||
RBAM_036490__ 251 ICSSSINGRTIGVELSDLKMKERSILVAGGSRKRKAIHGALKGKYANVLI 300
BSNT_06049___ 301 IDQHTARALVNDL 313
.|||||:.|:.:|
RBAM_036490__ 301 TDQHTAKKLIQEL 313
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