Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06049 and RBAM_036490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:32
# Commandline: needle
# -asequence dna-align/BSNT_06049___deoR.1.9828.seq
# -bsequence dna-align/RBAM_036490___deoR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06049___deoR-RBAM_036490___deoR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06049___deoR-RBAM_036490___deoR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06049___deoR
# 2: RBAM_036490___deoR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 961
# Identity: 720/961 (74.9%)
# Similarity: 720/961 (74.9%)
# Gaps: 38/961 ( 4.0%)
# Score: 2674.0
#
#
#=======================================
BSNT_06049___ 1 ATGGATCGGGAAAAACAACAATTAAGCATAGAAGCGGCAAGGCTTTACTA 50
||||||||.||||||||.||..|.||||||||||||||||..||.||.||
RBAM_036490__ 1 ATGGATCGTGAAAAACAGCAGCTCAGCATAGAAGCGGCAAAACTATATTA 50
BSNT_06049___ 51 TCAGTCTGACTACAGTCAGCAGCAAATTGCTGAGCAGCTCAACATTTCAA 100
|||.||.||.|||||.||||||||.||.||.||.|.|||..|..|.|||.
RBAM_036490__ 51 TCAATCAGATTACAGCCAGCAGCAGATCGCCGAACGGCTTGATCTGTCAC 100
BSNT_06049___ 101 GGCCAACCGTTTCCCGGCTGCTGCAATATGCAAAGGAAAAAGGGTATGTC 150
|.||.||||||||..|||||||.||.||.||||||||||||||||||||.
RBAM_036490__ 101 GCCCCACCGTTTCAAGGCTGCTTCAGTACGCAAAGGAAAAAGGGTATGTT 150
BSNT_06049___ 151 CAGATTCGCGTCATGGACCCTTTTGAGGATTTGGATGCGCTCGGTTCCAT 200
||.||||||||.||||||||.|||||||||.||||.|..|||||..|.|.
RBAM_036490__ 151 CAAATTCGCGTTATGGACCCGTTTGAGGATCTGGACGAACTCGGCGCGAA 200
BSNT_06049___ 201 ACTTGAAGAGAAATACGGGCTCCTTGAGGCGCATGTTGTGTTTTCCCC-- 248
|||.|||||.|||||||||||.|||||||||||.||.||.|||||.||
RBAM_036490__ 201 ACTGGAAGAAAAATACGGGCTGCTTGAGGCGCACGTCGTCTTTTCTCCAA 250
BSNT_06049___ 249 --GACACCCGATTATGCAGG-AATTACACATGACCTAAGCCGCTATGGTG 295
|| |||||| .|||| .|||||||||.||.|||||||||||||.|
RBAM_036490__ 251 GTGA----CGATTA-CCAGGCCATTACACATTACTTAAGCCGCTATGGCG 295
BSNT_06049___ 296 CAGAATATATGCATGAAACGGTAAAAGACGGCGACATTGTCGGCGTCAGC 345
||||.|||||||||.||||.|||||.||||||||.||..|||||||.|||
RBAM_036490__ 296 CAGACTATATGCATAAAACCGTAAAGGACGGCGATATACTCGGCGTAAGC 345
BSNT_06049___ 346 TGGGGAACTACCATGTATCAAATCGCGCAAAA----CATGCAGCCGAAGC 391
|||||.||.||.|||||.||.||||| || ||||.|||||||||
RBAM_036490__ 346 TGGGGGACGACGATGTACCAGATCGC----AAGCCGCATGGAGCCGAAGC 391
BSNT_06049___ 392 AAGTAAAAGGCGTCGAGGTCGTCCAACTGAAAGGCGGCATCAGCCATTCC 441
|.|||||..||||.||.|||||.||.|||||||||||||||||.||||||
RBAM_036490__ 392 AGGTAAAGAGCGTTGAAGTCGTGCAGCTGAAAGGCGGCATCAGTCATTCC 441
BSNT_06049___ 442 CGGGTAAGCACGTATTCGGCTGAAACGATTCAGCTGTTTGCGGAGGCTTT 491
...||.|..|||||||||.|||||||||||||||||||.||.||.||.||
RBAM_036490__ 442 AATGTTAATACGTATTCGTCTGAAACGATTCAGCTGTTCGCCGAAGCATT 491
BSNT_06049___ 492 TCAAACGATGCCGCGCTATCTCCCGCTTCCCGTCGTGTTTGATAATGCGG 541
|||.||.||||||.|.|||.|.|||||.||.||..|.|||||.|..||.|
RBAM_036490__ 492 TCAGACCATGCCGAGGTATTTGCCGCTGCCGGTTATATTTGACAGCGCCG 541
BSNT_06049___ 542 ATGTGAAGCGAATGGTGGA----GAAAGACCGTCATATTGAGCGGATCAT 587
|||||||.|..|||||.|| ||.||| ||||||.||||||||||
RBAM_036490__ 542 ATGTGAAACAGATGGTCGAACGGGACAGA----CATATTAAGCGGATCAT 587
BSNT_06049___ 588 CGAGATGGGAAAGCAGGCGAATATCGCTCTCTTCACGGTGGGGACCGTTC 637
.||.|||||.|..||.||.||||||||.||.||.|||||.||.|||||.|
RBAM_036490__ 588 TGAAATGGGCAGACAAGCCAATATCGCCCTGTTTACGGTCGGAACCGTCC 637
BSNT_06049___ 638 GTGACGAAGCGCTGCTGTTCCGGCTCGGATATTTTAACGAAGAAGAGAAA 687
|.||.||.||||||||.|||.|.|||||.|||||....||||||||||||
RBAM_036490__ 638 GGGATGAGGCGCTGCTTTTCAGACTCGGCTATTTCCGGGAAGAAGAGAAA 687
BSNT_06049___ 688 GCCCTGCTGAAAAAACAGGCCGTGGGTGATATTTGTTCACGCTTTTTTGA 737
....||||||||..||..|..||.||.|||||||||||.|||||||||||
RBAM_036490__ 688 CAATTGCTGAAAGCACGCGGAGTCGGCGATATTTGTTCGCGCTTTTTTGA 737
BSNT_06049___ 738 TGCGAAAGGGAATATTTGCAGCAGCGCCATCAATGACCGGACCATCGGTG 787
.|.|.||||.|..||||||||||||..|||.||.|.|.||||.|||||.|
RBAM_036490__ 738 CGAGGAAGGCAGGATTTGCAGCAGCAGCATTAACGGCAGGACGATCGGAG 787
BSNT_06049___ 788 TTGAGCTTGAAGACCTCAGACTGAAGGAACGCTCCATTTTAGTTGCCGGC 837
|.|||||....|||.|.|.|.||||.||.||.||.|||.|.||.||.|||
RBAM_036490__ 788 TCGAGCTCAGCGACTTGAAAATGAAAGAGCGTTCGATTCTGGTGGCGGGC 837
BSNT_06049___ 838 GGAAGCAGAAAA------GTATCTTCCATTCACGGAGCATTAACCGGAAA 881
||.||||||||| | ||||||||||.||..|.|..|||||
RBAM_036490__ 838 GGCAGCAGAAAACGCAAGG------CCATTCACGGTGCTCTGAAAGGAAA 881
BSNT_06049___ 882 ATATGCCAACGTTTTAATCATTGACCAGCATACCGCGAGGGCGCTTGTTA 931
.||.|||||||||||.||.|..||.||||||||.||.|.....||..||.
RBAM_036490__ 882 GTACGCCAACGTTTTGATTACCGATCAGCATACGGCCAAAAAACTCATTC 931
BSNT_06049___ 932 ATGATTTGTGA 942
|.||.||||||
RBAM_036490__ 932 AAGAATTGTGA 942
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