Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06043 and RBAM_036460
See
DNA alignment /
Visit
BSNT_06043 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:32
# Commandline: needle
# -asequence pep-align/BSNT_06043___pdp.1.9828.seq
# -bsequence pep-align/RBAM_036460___pdp.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06043___pdp-RBAM_036460___pdp.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06043___pdp-RBAM_036460___pdp.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06043___pdp
# 2: RBAM_036460___pdp
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 433
# Identity: 401/433 (92.6%)
# Similarity: 424/433 (97.9%)
# Gaps: 0/433 ( 0.0%)
# Score: 2006.0
#
#
#=======================================
BSNT_06043___ 1 MRMVDIIIKKQNGKELTTEEIQFFVNGYTDGSIPDYQASALAMAIFFQDM 50
|||||:|:|||||||||||||||||.|||||||||||||||||||:||||
RBAM_036460__ 1 MRMVDLIVKKQNGKELTTEEIQFFVKGYTDGSIPDYQASALAMAIYFQDM 50
BSNT_06043___ 51 SDRERADLTMAMVNSGETIDLSAIEGIKVDKHSTGGVGDTTTLVLAPLVA 100
:|:|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036460__ 51 TDQERADLTMAMVNSGETIDLSAIEGIKVDKHSTGGVGDTTTLVLAPLVA 100
BSNT_06043___ 101 ALDVPVAKMSGRGLGHTGGTIDKLEAIDGFHVELTKDEFIKLVNRDKVAV 150
||.||||||||||||||||||||||||:||||||:|||||||||||||||
RBAM_036460__ 101 ALGVPVAKMSGRGLGHTGGTIDKLEAIEGFHVELSKDEFIKLVNRDKVAV 150
BSNT_06043___ 151 IGQSGNLTPADKKLYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDV 200
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036460__ 151 IGQSGNLTPADKKLYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDV 200
BSNT_06043___ 201 KTGAGAFMKTEEDAAELAKAMVRIGNNVGRQTMAVISDMSQPLGFAIGNA 250
||||||||||:|||..||||||||||||||||||||||||||||||||||
RBAM_036460__ 201 KTGAGAFMKTDEDAVNLAKAMVRIGNNVGRQTMAVISDMSQPLGFAIGNA 250
BSNT_06043___ 251 LEVKEAIDTLKGEGPEDLHELVLTLGSQMVVLAKKADTLDEARAKLEEVM 300
|||:||||||:|||||||:|||||||||||||||||:||:|||.||:|||
RBAM_036460__ 251 LEVQEAIDTLRGEGPEDLNELVLTLGSQMVVLAKKAETLEEARMKLQEVM 300
BSNT_06043___ 301 KNGKALEKFKDFLKNQGGDSSIVDDPSKLPQAAYQIDVPAKEAGVVSEIV 350
||||||||||:||.|||||:|:||||||||||||:|||||||||||||||
RBAM_036460__ 301 KNGKALEKFKEFLSNQGGDASVVDDPSKLPQAAYKIDVPAKEAGVVSEIV 350
BSNT_06043___ 351 ADEIGVAAMLLGAGRATKEDEIDLAVGIMLRKKVGDKVEKGEPLVTLYAN 400
||||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_036460__ 351 ADEIGVAAMLLGAGRATKEDEIDLAVGIMLRKKVGDNVEKGEPLVTLYAN 400
BSNT_06043___ 401 RENVDEVIAKVYDNIRIAAEAKAPKLIHTLITE 433
||||::|.|||||||||:.:|:|||||||||||
RBAM_036460__ 401 RENVEDVTAKVYDNIRISEKAEAPKLIHTLITE 433
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.