Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06035 and RBAM_036380

See DNA alignment / Visit BSNT_06035 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:31
# Commandline: needle
#    -asequence pep-align/BSNT_06035.1.9828.seq
#    -bsequence pep-align/RBAM_036380.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06035-RBAM_036380.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06035-RBAM_036380.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06035
# 2: RBAM_036380
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 129
# Identity:     106/129 (82.2%)
# Similarity:   116/129 (89.9%)
# Gaps:           0/129 ( 0.0%)
# Score: 550.0
# 
#
#=======================================

BSNT_06035         1 MKKTIKVAAAVIKNDKDMILCALRSPIMSLANLWEFPGGKLEEGENAREA     50
                     ||||||||||||:|:.:.||||||||.|||.|||||||||||||||||||
RBAM_036380        1 MKKTIKVAAAVIQNENNEILCALRSPTMSLPNLWEFPGGKLEEGENAREA     50

BSNT_06035        51 LVREIHEELGCKIEAGEIIADIHHEYEKVIVNLISIQAKIVEDEPVAKEH    100
                     |||||.|||.|||.||::||||||||||||||||||:||||..:||||||
RBAM_036380       51 LVREIEEELDCKIVAGDVIADIHHEYEKVIVNLISIKAKIVSGKPVAKEH    100

BSNT_06035       101 AELRWVPVSELESLEWAPADLPTVNALVN    129
                     ||.||||:.|||||||||||||||:.|:.
RBAM_036380      101 AEFRWVPIRELESLEWAPADLPTVSVLIR    129


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