Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06035 and RBAM_036380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:31
# Commandline: needle
# -asequence dna-align/BSNT_06035.1.9828.seq
# -bsequence dna-align/RBAM_036380.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06035-RBAM_036380.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06035-RBAM_036380.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06035
# 2: RBAM_036380
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 398
# Identity: 310/398 (77.9%)
# Similarity: 310/398 (77.9%)
# Gaps: 16/398 ( 4.0%)
# Score: 1178.0
#
#
#=======================================
BSNT_06035 1 GTGAAAAAAACAATCAAAGTAGCTGCAGCAGTGATTAAAAACGATAAAGA 50
.|||||||||||||.||||||||.||.|||||.||..||||.|| |||.|
RBAM_036380 1 TTGAAAAAAACAATAAAAGTAGCCGCCGCAGTCATACAAAATGA-AAACA 49
BSNT_06035 51 TATGATAT--TATGTGCACTTCGTTCGCCAATCATGTCTTTGGCCAATCT 98
||||.|| |||||||.||.|||||.||||..||||||.||.|.|||||
RBAM_036380 50 -ATGAAATTCTATGTGCTCTACGTTCTCCAACAATGTCTCTGCCTAATCT 98
BSNT_06035 99 ATGGGAATTCCCAGGAGGGAAACTTGAAGAGGGTGAGAATGCACGAGAAG 148
.|||||.||.||.||.||.||.||||||||.||.||||||||||||||||
RBAM_036380 99 GTGGGAGTTTCCTGGTGGAAAGCTTGAAGAAGGGGAGAATGCACGAGAAG 148
BSNT_06035 149 CTCTTGTAAGAGAAATTCATGAGGAGCTTGGTTGTAAAATTGAAGCAGGT 198
|.|||||||||||||||.|.|||||.||||.|||||||||||..||.||.
RBAM_036380 149 CACTTGTAAGAGAAATTGAAGAGGAACTTGATTGTAAAATTGTTGCGGGC 198
BSNT_06035 199 GAAATAATTGCTGACATTCATCACGAATATGAAAAAGTCATTGTTAATTT 248
||..|.||.||.||.||||||||.||||||||.||.|||||.||.|||||
RBAM_036380 199 GATGTGATAGCCGATATTCATCATGAATATGAGAAGGTCATCGTCAATTT 248
BSNT_06035 249 GATTTCTATTCAAGCGAAAATTGTA-GAGGATGAA-CCTGTTGCCAAAGA 296
.|||||.||..|||||||.|||||| .||| ||| ||.||.||.|||||
RBAM_036380 249 AATTTCAATAAAAGCGAAGATTGTATCAGG--GAAGCCGGTAGCAAAAGA 296
BSNT_06035 297 ACATGCGGAACTCAGATGGGTGCC----CGTGAGTGAACTTGAGTCACTT 342
.|||||||||.||||||||||||| |||||| ||.||.|||||.
RBAM_036380 297 GCATGCGGAATTCAGATGGGTGCCTATTCGTGAG----CTAGAATCACTA 342
BSNT_06035 343 GAATGGGCACCTGCTGATCTTCCAACCGTAAATGCACTAGTTAATTAA 390
||.||||||||.|||||||||||.||||||..||...||.||..||||
RBAM_036380 343 GAGTGGGCACCCGCTGATCTTCCGACCGTATCTGTTTTAATTCGTTAA 390
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