Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06034 and RBAM_036370

See DNA alignment / Visit BSNT_06034 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:30
# Commandline: needle
#    -asequence pep-align/BSNT_06034.1.9828.seq
#    -bsequence pep-align/RBAM_036370.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06034-RBAM_036370.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06034-RBAM_036370.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06034
# 2: RBAM_036370
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1044
# Identity:     793/1044 (76.0%)
# Similarity:   933/1044 (89.4%)
# Gaps:           1/1044 ( 0.1%)
# Score: 4272.0
# 
#
#=======================================

BSNT_06034         1 MKKNSGFHEELQEKHQLYPVEHRFQPVLPKEYPEILTLHIAKQFGEKIKT     50
                     |:.:.|||||:|::.:|||..||.|||.||||.|:||||.|||..|..:|
RBAM_036370        1 MRNHRGFHEEIQQQQKLYPTSHRIQPVSPKEYAEVLTLHTAKQLSETFQT     50

BSNT_06034        51 LVHHGQYNQAVELTQKISSDLGNDTAFTIPLSSVLYHVGDLDLPVSEHFS    100
                     ||...||.||::|::|::|.||..|.|::|||:|||.:.:::||:||.||
RBAM_036370       51 LVDQDQYEQAIQLSEKVASQLGQHTNFSLPLSTVLYSLNEMELPISEEFS    100

BSNT_06034       101 LSRLNLLGNYRADDNFFKALKNEMLTADRVDFMVSFTRWSGVQLLIPPLQ    150
                     |.||.||||::..||||||||:||||||||||||||||||||||||||||
RBAM_036370      101 LHRLKLLGNHQTHDNFFKALKHEMLTADRVDFMVSFTRWSGVQLLIPPLQ    150

BSNT_06034       151 ELNKRNVPVRIITSTYMGITEPKALKQLMQFQNVDLRIVNDYSQSFHTKA    200
                     ||.||:|||||||||||||||||||:.|:||:||:|:|.|:|.:||||||
RBAM_036370      151 ELAKRHVPVRIITSTYMGITEPKALRHLLQFENVELKIANEYKKSFHTKA    200

BSNT_06034       201 YLFERLSGQHSVIIGSSNLSQSALTTGYELNARIPDTKYLPIFQQTKDVF    250
                     |||||.|||||||:|||||||:|||||||||.|:|:|:|||::|||||:|
RBAM_036370      201 YLFERCSGQHSVIVGSSNLSQAALTTGYELNVRLPETRYLPVYQQTKDLF    250

BSNT_06034       251 NKVWVEKTQPVDDQFLKAYEEFQAANHKMSASLVSQNSLYQTKIQPNAMQ    300
                     :.||.|||||||:|||:|||||||.:.|:|||..:|||||:||:.|||||
RBAM_036370      251 DTVWNEKTQPVDEQFLQAYEEFQAGSQKVSASFAAQNSLYKTKMSPNAMQ    300

BSNT_06034       301 EIALKNLKKTREQGEERAVIIAATGTGKTYLAAFDFSEYQPKKYLFIAHR    350
                     :.||:||||||.:||.:||||||||||||:||||||.:::|.||||:|||
RBAM_036370      301 KEALRNLKKTRNEGETKAVIIAATGTGKTFLAAFDFEQFKPNKYLFLAHR    350

BSNT_06034       351 EELLTKAIETFEKVTNDHDNFGLLTGSKKEWNKRFLFSTVQTLYKEETLK    400
                     |||||||||||:||||:|::||||||:|||.:|||||||||||:|:|||:
RBAM_036370      351 EELLTKAIETFQKVTNNHEDFGLLTGTKKERDKRFLFSTVQTLHKKETLE    400

BSNT_06034       401 RFAPDEFDYIVIDEFHHAEASTYQSVLNYFKPGFLLGLTATPERLDGKDV    450
                     .|:.||||||||||||||||||||:|||||.|.|||||||||||||||||
RBAM_036370      401 SFSTDEFDYIVIDEFHHAEASTYQAVLNYFTPKFLLGLTATPERLDGKDV    450

BSNT_06034       451 LEICNHNVVYEIRLRDALEAELLAPFHYFGIPDHTVDYDKVKITNGVYDE    500
                     |:||:|||||||||||||:||||||||||||.||||||:|||:.||:|:|
RBAM_036370      451 LQICDHNVVYEIRLRDALKAELLAPFHYFGISDHTVDYEKVKVKNGLYEE    500

BSNT_06034       501 RSLVNHLKNHERVDYVIKMINMYGFDGERMCGLGFCTNVEHAQYMSQEFN    550
                     :|||:|||.|:||:|::||||||||.||:|.|||||||||||.|||.|||
RBAM_036370      501 KSLVDHLKTHKRVEYIMKMINMYGFHGEKMVGLGFCTNVEHAIYMSDEFN    550

BSNT_06034       551 QLGLHTTYLTGQDSSAQRQKVIRELEDPHHSLELIFTVDIFNEGIDIPKL    600
                     :||.:||||||.||.|:||:|||.|||||||||:||||||||||||||||
RBAM_036370      551 KLGFYTTYLTGNDSPAKRQEVIRHLEDPHHSLEIIFTVDIFNEGIDIPKL    600

BSNT_06034       601 NLLLFLRPTESPTIFIQQLGRGLRKTDDKEFVTVLDFIGNYQKSFVIPLA    650
                     |||||||||||||||||||||||||||||||||:||||||||||||||||
RBAM_036370      601 NLLLFLRPTESPTIFIQQLGRGLRKTDDKEFVTILDFIGNYQKSFVIPLA    650

BSNT_06034       651 LSGQTSQKSFDKDSLRVAVTHEFADLPGGSYVDLASVTKKEILHKIDSIK    700
                     |||||||||||||||||||||||:||||||||||::|||||||:|||.||
RBAM_036370      651 LSGQTSQKSFDKDSLRVAVTHEFSDLPGGSYVDLSAVTKKEILNKIDHIK    700

BSNT_06034       701 LNSAAMLKTLYYQFKRDIGRSPELLDFLYSDQAPGLTFFIKKYKSWVETK    750
                     |||.|||||||.|||:::||||||:|||||:||||||||||||||||:||
RBAM_036370      701 LNSDAMLKTLYKQFKQELGRSPELIDFLYSEQAPGLTFFIKKYKSWVQTK    750

BSNT_06034       751 RKMDDLHSLDKEVLNDSLVLRMVSWLEQQFPIKWPYDLLLLQCGFNTQRI    800
                     :|||||:..|:.:||:.||:.:|:.||||.||||||:.|:||.||:...|
RBAM_036370      751 KKMDDLNVTDEGILNNPLVVGIVAKLEQQLPIKWPYEWLILQSGFHKNII    800

BSNT_06034       801 TVEDVKKSLEDTFHLKIKNTNIHDNLIKRSMERLSTPHKKQQWSFGTVEE    850
                     |:||||:|||..||::| .|:.||:||:|:||||:...:||.|.|||::.
RBAM_036370      801 TIEDVKESLEKQFHIQI-TTDTHDDLIQRAMERLTKSDQKQNWRFGTLQG    849

BSNT_06034       851 NTFILQLNIFERLCHPRFGPYIKERIQYGLTEFRRMNNLEALLSSELQLT    900
                     :||.|...:.|.|..|.||||||||:.|||.|||||||:|||.|.|::||
RBAM_036370      850 DTFKLDTEVSEILNDPLFGPYIKERVHYGLIEFRRMNNIEALASKEIKLT    899

BSNT_06034       901 LYQTYTRNELIHLFQSTDQEGTWREGVRRVNNNYLIFITLNKSKKVEDHL    950
                     :||||||||||:||||||||||||||||||.|:|||||.||||:||||||
RBAM_036370      900 MYQTYTRNELIYLFQSTDQEGTWREGVRRVKNHYLIFINLNKSEKVEDHL    949

BSNT_06034       951 LYKDYFIDPHHFHWQSQNQTSHDSPVGQNFINHRQKEYKIHLFVRKFSEM   1000
                     |||||||||.||||||||||||.|.||||||:|::|.|.||||||||:||
RBAM_036370      950 LYKDYFIDPSHFHWQSQNQTSHTSSVGQNFIHHKEKGYHIHLFVRKFTEM    999

BSNT_06034      1001 HDITLPFIYLGKVDYVSSNGDKPMNVIWKLHQPVPENLYVDLIN   1044
                     |:|||||||:|:.|||||:|||||||.|||||||||||||||.|
RBAM_036370     1000 HNITLPFIYVGEADYVSSHGDKPMNVKWKLHQPVPENLYVDLTN   1043


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_06034 and RBAM_036370

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
