Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06027 and RBAM_036360
See
DNA alignment /
Visit
BSNT_06027 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:30
# Commandline: needle
# -asequence pep-align/BSNT_06027___bglP.1.9828.seq
# -bsequence pep-align/RBAM_036360___bglP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06027___bglP-RBAM_036360___bglP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06027___bglP-RBAM_036360___bglP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06027___bglP
# 2: RBAM_036360___bglP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 612
# Identity: 495/612 (80.9%)
# Similarity: 542/612 (88.6%)
# Gaps: 4/612 ( 0.7%)
# Score: 2483.0
#
#
#=======================================
BSNT_06027___ 1 MDYDKLSKDILQLVGGEDNVQRVIHCMTRLRFNLHDNAKADRSQLEQLPG 50
|||.|:||:||||||||:|||.||||||||||||:||||||||.|||..|
RBAM_036360__ 1 MDYHKISKEILQLVGGEENVQSVIHCMTRLRFNLYDNAKADRSGLEQTEG 50
BSNT_06027___ 51 VMGTNISGEQFQIIIGNDVPKVYQAIVRQSNLSDEKSAGSSSQKKNVLSA 100
||||||||.|||||:||||||||||::..|.||.|.:..:|.||||||||
RBAM_036360__ 51 VMGTNISGGQFQIIVGNDVPKVYQALMESSGLSHESANKTSKQKKNVLSA 100
BSNT_06027___ 101 VFDVISGVFTPILPAIAGAGMIKGLVALAVTFGWMAEKSQVHVILTAVGD 150
||||||||||||||||||||||||||||||||||:.||||.|.|||||||
RBAM_036360__ 101 VFDVISGVFTPILPAIAGAGMIKGLVALAVTFGWLLEKSQTHSILTAVGD 150
BSNT_06027___ 151 GAFYFLPLLLAMSAARKFGSNPYVAAAIAAAILHPDLTALLGAGKPISFI 200
|||||||||||:||||||..|||||||:|.|||||||||||||||.||||
RBAM_036360__ 151 GAFYFLPLLLAVSAARKFRCNPYVAAAVAGAILHPDLTALLGAGKSISFI 200
BSNT_06027___ 201 GLPVTAATYSSTVIPILLAIWIASYVEKWIDRFTHASLKLIVVPTFTLLI 250
|||||||||||||||||||||:.|||||.|||.|.:|||||.||..||:|
RBAM_036360__ 201 GLPVTAATYSSTVIPILLAIWLMSYVEKGIDRITPSSLKLIAVPMLTLVI 250
BSNT_06027___ 251 VVPLTLITVGPLGAILGEYLSSGVNYLFDHAGLVAMILLAGTFSLIIMTG 300
|||:|||||||||||||.|||.|||.||:|||:.||||||||||||||||
RBAM_036360__ 251 VVPVTLITVGPLGAILGNYLSVGVNDLFNHAGIAAMILLAGTFSLIIMTG 300
BSNT_06027___ 301 MHYAFVPIMINNIAQNGHDYLLPAMFLANMGQAGASFAVFLRSRNKKFKS 350
||||.|||||||||||||||:||||||||||||||||||||:|:||.|||
RBAM_036360__ 301 MHYALVPIMINNIAQNGHDYILPAMFLANMGQAGASFAVFLKSKNKTFKS 350
BSNT_06027___ 351 LALTTSITALMGITEPAMYGVNMRLKKPFAAALIGGAAGGAFYGMTGVAS 400
||.||.||||||||||||||||||||||||||||||||||||||:|||||
RBAM_036360__ 351 LAFTTGITALMGITEPAMYGVNMRLKKPFAAALIGGAAGGAFYGVTGVAS 400
BSNT_06027___ 401 YIVGGNAGLPSIPVFIGPTFIYAMIGLVIAFAAGTAAAYLLGFEDVPSD- 449
||||||||||||||||||||:||:|||.::||||.|||.|:|||||.|:
RBAM_036360__ 401 YIVGGNAGLPSIPVFIGPTFLYALIGLFVSFAAGIAAALLIGFEDVQSER 450
BSNT_06027___ 450 --GSQQPAVHEGSREIIHSPIKGEVKALSEVKDGVFSVGIMGKGFAIEPE 497
.|:.|.|..|. |||||||||||||||||.|.|||.|:|||||||.||
RBAM_036360__ 451 DKASEAPGVTAGG-EIIHSPIKGEVKALSEVNDSVFSGGMMGKGFAILPE 499
BSNT_06027___ 498 EGEVVSPVRGSVTTIFKTKHAIGITSDQGAEILIHIGLDTVKLEGQWFTV 547
||..||||.|.||.:|||||||||||.:|||:|||||||||:|:|:.|.:
RBAM_036360__ 500 EGAAVSPVEGRVTAVFKTKHAIGITSTRGAEVLIHIGLDTVRLDGRHFEM 549
BSNT_06027___ 548 HVKEGDKVAPGDPLVSFDLEQIKDAGYDVITPVIVTNTDQYSFSPVKEIG 597
||||||.|||||.|::||:::||.||:|||||||:||||||||:.||:.|
RBAM_036360__ 550 HVKEGDTVAPGDLLITFDIDEIKAAGFDVITPVIITNTDQYSFTDVKKSG 599
BSNT_06027___ 598 KVQTKEALLALS 609
.|:..|||||||
RBAM_036360__ 600 MVKPNEALLALS 611
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.