Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06027 and RBAM_036360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:30
# Commandline: needle
# -asequence dna-align/BSNT_06027___bglP.1.9828.seq
# -bsequence dna-align/RBAM_036360___bglP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06027___bglP-RBAM_036360___bglP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06027___bglP-RBAM_036360___bglP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06027___bglP
# 2: RBAM_036360___bglP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1873
# Identity: 1415/1873 (75.5%)
# Similarity: 1415/1873 (75.5%)
# Gaps: 80/1873 ( 4.3%)
# Score: 5200.0
#
#
#=======================================
BSNT_06027___ 1 ATGGATTATGATAAATTATCGAAGGACATATTACAACTCGTAGGCGGTGA 50
|||||.|||.|||||.||||.||.||.|||||||||||.||.|||||.||
RBAM_036360__ 1 ATGGACTATCATAAAATATCAAAAGAGATATTACAACTTGTCGGCGGGGA 50
BSNT_06027___ 51 AGACAACGTTCAGCGCGTGATTCACTGCATGACGAGGCTGCGTTTTAATC 100
.||.||.||||||.|.||.||.||.|||||||||.||||.|||||||||.
RBAM_036360__ 51 GGAGAATGTTCAGAGTGTCATCCATTGCATGACGCGGCTTCGTTTTAATT 100
BSNT_06027___ 101 TTCATGACAACGCGAAGGCGGATCGCAGTCAGCTGGAGCAGCTGCCGGGG 150
|..|||||||.|||||.||.|||||.||...||||||.|||..|...||.
RBAM_036360__ 101 TGTATGACAATGCGAAAGCAGATCGGAGCGGGCTGGAACAGACGGAAGGC 150
BSNT_06027___ 151 GTGATGGGCACCAATATCAGCGGCGAGCAGTTTCAAATCATTATCGGAAA 200
||||||||.||.|||||||||||||.|||.|||||.||||||.||||.||
RBAM_036360__ 151 GTGATGGGGACAAATATCAGCGGCGGGCAATTTCAGATCATTGTCGGCAA 200
BSNT_06027___ 201 CGATGTGCCGAAGGTGTATCAGGCGATTGTGCGGCAGAGCA---ATCTCA 247
.||||||||||||||||||||||| |.||..|.|||||| ..||||
RBAM_036360__ 201 TGATGTGCCGAAGGTGTATCAGGC---TTTGATGGAGAGCAGCGGGCTCA 247
BSNT_06027___ 248 GTGATGAAAAGAGCGCTGGTTCATCCTC---TCAGAAAAAGAATGTGCTG 294
||.||||| |||||......|.|.|| .|||||.||.|||||||||
RBAM_036360__ 248 GTCATGAA---AGCGCAAACAAAACTTCGAAGCAGAAGAAAAATGTGCTG 294
BSNT_06027___ 295 AGTGCGGTCTTTGATGTGATTTCTGGGGTGTTTACTCCGATTCTGCCTGC 344
|||||.||.|||||.||||||||.||.||||||||.|||||||||||.||
RBAM_036360__ 295 AGTGCCGTATTTGACGTGATTTCCGGTGTGTTTACACCGATTCTGCCGGC 344
BSNT_06027___ 345 GATTGCGGGGGCGGGGATGATCAAAGGGCTTGTTGCGCTGGCAGTTACGT 394
.|||||.||.||.||.|||||.|||||||||||.|||||.||.||.||.|
RBAM_036360__ 345 CATTGCAGGAGCCGGCATGATAAAAGGGCTTGTCGCGCTAGCGGTGACAT 394
BSNT_06027___ 395 TTGGCTGGATGGCGGAGAAGAGCCAGGTTCATGTCATTTTGACGGCTGTC 444
|.||||||.||..|||||||||||||..|||...||||.|.|||||||||
RBAM_036360__ 395 TCGGCTGGTTGTTGGAGAAGAGCCAGACTCACAGCATTCTCACGGCTGTC 444
BSNT_06027___ 445 GGTGACGGTGCGTTCTACTTCCTGCCGCTCCTGCTAGCGATGAGTGCGGC 494
||||||||||||||.||.||.||||||||..||||.|||.|.||.|||||
RBAM_036360__ 445 GGTGACGGTGCGTTTTATTTTCTGCCGCTTTTGCTTGCGGTAAGCGCGGC 494
BSNT_06027___ 495 GAGAAAATTCGGAAGCAATCCGTACGTAGCGGCAGCCATTGCGGCGGCGA 544
||||||||||.||.|.|||||||||||.|||||.||..|.||||..||||
RBAM_036360__ 495 GAGAAAATTCAGATGTAATCCGTACGTGGCGGCCGCTGTGGCGGGTGCGA 544
BSNT_06027___ 545 TCCTGCATCCGGATTTGACAGCCCTGCTCGGTGCGGGGAAACCGATTTCC 594
|.||||||||||||||.||.||||||||.||.||.||||||...||.|||
RBAM_036360__ 545 TTCTGCATCCGGATTTAACGGCCCTGCTTGGAGCAGGGAAAAGCATCTCC 594
BSNT_06027___ 595 TTTATCGGGCTTCCTGTAACCGCTGCCACTTATTCGTCAACGGTCATCCC 644
||||||||.||||||||||||||||||||.|||||.||.||.||||||||
RBAM_036360__ 595 TTTATCGGTCTTCCTGTAACCGCTGCCACGTATTCATCGACAGTCATCCC 644
BSNT_06027___ 645 GATTTTGCTGGCGATATGGAT--TGCTTCATACGTGGAAAAATGGATTGA 692
|||||||||||||||||||.| || ||.||.||.||.|||.|.|||||
RBAM_036360__ 645 GATTTTGCTGGCGATATGGCTGATG--TCCTATGTAGAGAAAGGAATTGA 692
BSNT_06027___ 693 CCGTTTTACACACG----CATCTCTCAAATTGATTGTGGTTCCGACATTC 738
||| |..|||| |||||.|.||||||||||..|||||||...|.
RBAM_036360__ 693 CCG----AATCACGCCTTCATCTTTGAAATTGATTGCCGTTCCGATGCTT 738
BSNT_06027___ 739 ACGCTATTGATTGTCGTGCCGCTGACATTGATTACAGTCGGTCCGCTTGG 788
|||||..||||.||||||||..|.||.|||||.||||||||.|||||.||
RBAM_036360__ 739 ACGCTTGTGATCGTCGTGCCTGTCACCTTGATCACAGTCGGCCCGCTCGG 788
BSNT_06027___ 789 CGCTATTTTAGGAGAA-TACTTGTCT-TCTGGGGTCAATTATTTGTTTGA 836
|||.|||.|.|| ||| |||.||||| || ||.||||||.|||||||..|
RBAM_036360__ 789 CGCGATTCTCGG-GAATTACCTGTCTGTC-GGCGTCAATGATTTGTTCAA 836
BSNT_06027___ 837 TCATGCAGGGCTTGTGGCGATGATTTTGCTGGCGGGTACATTCTCTTTAA 886
||||||.||..|||..|||||||||.|.||.||.||.|||||.||..|.|
RBAM_036360__ 837 TCATGCGGGTATTGCCGCGATGATTCTTCTTGCCGGCACATTTTCCCTCA 886
BSNT_06027___ 887 TCATTATGACGGGCATGCACTATGCCTTTGTGCCGATTATGATCAACAAC 936
|||||||||||||.|||||.|||||..||||||||||.||||||||.|||
RBAM_036360__ 887 TCATTATGACGGGGATGCATTATGCGCTTGTGCCGATCATGATCAATAAC 936
BSNT_06027___ 937 ATCGCTCAAAACGGCCACGATTATTTACTGCCGGCTATGTTTTTGGCGAA 986
|||||.||||||||.||.||||||.|.|||||.||.||||||||||||||
RBAM_036360__ 937 ATCGCCCAAAACGGACATGATTATATTCTGCCTGCGATGTTTTTGGCGAA 986
BSNT_06027___ 987 TATGGGGCAGGCGGGAGCATCATTTGCAGTCTTCCTTCGCTCCAGAAACA 1036
||||||||||||.||.||.||||||||.||.|||.|....||||.|||||
RBAM_036360__ 987 TATGGGGCAGGCCGGCGCGTCATTTGCGGTTTTCTTAAAATCCAAAAACA 1036
BSNT_06027___ 1037 AAAAATTTAAATCACTCGCGCTTACCACAAGCATCACGGCGCTGATGGGG 1086
|||..||.|||||.||.|||.||||.||..||||.|||||..|||||||.
RBAM_036360__ 1037 AAACCTTCAAATCGCTGGCGTTTACGACGGGCATTACGGCATTGATGGGC 1086
BSNT_06027___ 1087 ATCACAGAACCTGCAATGTACGGCGTGAATATGCGATTGAAAAAGCCGTT 1136
||.||.|||||.||.|||||||||||.||.|||.||||||||||.|||||
RBAM_036360__ 1087 ATTACCGAACCCGCGATGTACGGCGTTAACATGAGATTGAAAAAACCGTT 1136
BSNT_06027___ 1137 TGCGGCCGCTTTGATTGGCGGTGCAGCCGGTGGCGCGTTTTACGGCATGA 1186
.|||||.||.||.||.|||||.||.||.||.||.||.||||||||..|.|
RBAM_036360__ 1137 CGCGGCAGCATTAATCGGCGGCGCGGCAGGCGGAGCTTTTTACGGTGTAA 1186
BSNT_06027___ 1187 CGGGTGTTGCTTCCTATATCGTCGGGGGGAATGCAGGTCTCCCGAGCATC 1236
||||.||.|||||.||.||.|||||.||.||.||.|||||.||||||||.
RBAM_036360__ 1187 CGGGCGTCGCTTCTTACATTGTCGGCGGAAACGCCGGTCTGCCGAGCATT 1236
BSNT_06027___ 1237 CCTGTCTTTATCGGCCCAACGTTTATTTACGCGATGATCGGCCTTGTGAT 1286
||.|||||||||||.||.||.|||.||||||||.|||||||.|||.|..|
RBAM_036360__ 1237 CCGGTCTTTATCGGGCCGACATTTCTTTACGCGCTGATCGGGCTTTTTGT 1286
BSNT_06027___ 1287 TGCGTTTGCGGCGGGAA------CAGCAGCTGCGTATTTGCTTGGATTCG 1330
..|.||||||||.||.| |.||| |||| ||.|.||.||.|
RBAM_036360__ 1287 CTCATTTGCGGCCGGTATTGCGGCGGCA-CTGC-----TGATCGGGTTTG 1330
BSNT_06027___ 1331 AGGATGTGCCTTCTG-ACGGCA------GCCAGCAGCCGGCAGTGCATGA 1373
|||||||.|..||.| ||||.| |.|.|.|| ||.||| |..|||
RBAM_036360__ 1331 AGGATGTACAGTCCGAACGGGACAAAGCGTCTGAAG-CGCCAG-GGGTGA 1378
BSNT_06027___ 1374 GGGCA-GCAGAGAGATCATTCACAGCCCGATTAAGGGAGAAGTGAAAGCC 1422
.|||| ||.||||.||||||||||||||||||||.||.|||||||||||.
RBAM_036360__ 1379 CGGCAGGCGGAGAAATCATTCACAGCCCGATTAAAGGCGAAGTGAAAGCA 1428
BSNT_06027___ 1423 TTAAGTGAAGTCAAAGATGGAGTATTTTCTGTCGGGATCATGGGAAAAGG 1472
|||||.|||||.||.||..|.||.|||||.|..||.||.|||||||||||
RBAM_036360__ 1429 TTAAGCGAAGTGAACGACAGCGTCTTTTCCGGTGGAATGATGGGAAAAGG 1478
BSNT_06027___ 1473 ATTTGCCATTGAGCCTGAAGAAGGAGAAGTTGTGTCGCCTGTTCGT---- 1518
.|||||.|||..|||||||||.||.|.||..||.||.|| |||
RBAM_036360__ 1479 TTTTGCGATTCTGCCTGAAGAGGGCGCAGCGGTTTCTCC----CGTAGAA 1524
BSNT_06027___ 1519 GGAAGCGTTACCACCATTTTTAAAACAAAACACGCAATTGGCATTACGAG 1568
||.||.||.||..||.|.|||||||||||.|||||.||.|||||||||||
RBAM_036360__ 1525 GGGAGGGTGACAGCCGTATTTAAAACAAAGCACGCCATCGGCATTACGAG 1574
BSNT_06027___ 1569 TGATCA----GGGAGCTGAAATACTCATACACATTGGATTGGACACGGTA 1614
|| ||||||.||..|.|||||.||.||.||..|.||.||.||.
RBAM_036360__ 1575 ----CACCCGGGGAGCCGAGGTTCTCATTCATATCGGGCTTGATACCGTC 1620
BSNT_06027___ 1615 AAGCTGGAGGGACAATGG----TTCACGGTTCACGTCAAAGAAGGCGACA 1660
..||||||.|| || || ||.| |.|.||.||||||||||||||.|
RBAM_036360__ 1621 CGGCTGGATGG-CA--GGCATTTTGA-GATGCATGTCAAAGAAGGCGATA 1666
BSNT_06027___ 1661 AGGTCGCACCGGGAGATCCGCTCGTGTCCTTTGATCTGGAGCAAATCAAA 1710
..|||||.||||||||||.|||..|..|.||||||.|.||..|.|| |||
RBAM_036360__ 1667 CTGTCGCGCCGGGAGATCTGCTGATTACTTTTGATATCGACGAGAT-AAA 1715
BSNT_06027___ 1711 GAC-GCGGGATATGACGTCATTACTCCGGTGATCGTGACCAACACAGACC 1759
|.| ||.||.|.||||||.||.||.|||||.|||.|.||.||.||.||.|
RBAM_036360__ 1716 GGCTGCCGGTTTTGACGTGATCACGCCGGTCATCATTACGAATACGGATC 1765
BSNT_06027___ 1760 AATATTCATTTTC-GCCGGTGAAAGAGATCGGTAAAGTGCAGA-CAAAAG 1807
|||||||||||.| |.| ||||||.|.|.||| ||.|..||.| |.||.|
RBAM_036360__ 1766 AATATTCATTTACAGAC-GTGAAAAAAAGCGG-AATGGTCAAACCGAACG 1813
BSNT_06027___ 1808 AAGCGCTGCTTGCTTTATCTTGA 1830
|||||||.||.||.|||||.|||
RBAM_036360__ 1814 AAGCGCTTCTGGCGTTATCCTGA 1836
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