Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06007 and RBAM_036290

See DNA alignment / Visit BSNT_06007 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:30
# Commandline: needle
#    -asequence pep-align/BSNT_06007.1.9828.seq
#    -bsequence pep-align/RBAM_036290___yxxG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06007-RBAM_036290___yxxG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06007-RBAM_036290___yxxG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06007
# 2: RBAM_036290___yxxG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 140
# Identity:      79/140 (56.4%)
# Similarity:    98/140 (70.0%)
# Gaps:           4/140 ( 2.9%)
# Score: 379.0
# 
#
#=======================================

BSNT_06007         1 MAKIKDDCLELELTPRRYQEMDDDPFILSIFELLENKKAIVRDYSAVLLE     50
                     ||||.|.|||||:|||||.|..|||||.:.|||||:.|.|.|||||||||
RBAM_036290__      1 MAKIGDGCLELEITPRRYHEAKDDPFISTTFELLEHNKVIARDYSAVLLE     50

BSNT_06007        51 SEYKLLISGIETLIMGNQDMINLETIDPLLILSINEENGNYSFKIKIILE    100
                     ||||:|||.||.|..||||.|.||||:|..||||::||.:|.|.|:.:  
RBAM_036290__     51 SEYKMLISDIEALSAGNQDRIRLETIEPFFILSIDKENEHYRFIIRFM--     98

BSNT_06007       101 GDVKFNSNLFEITCNEKKLESFADALKTNLEDVKKSSKLP    140
                      :...|:..:::.|||:|||.|...||::|:|.|..... 
RBAM_036290__     99 -ENHSNTTFYKLNCNEEKLEIFVKTLKSDLKDSKTLLGR-    136


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