Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06007 and RBAM_036290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:30
# Commandline: needle
# -asequence dna-align/BSNT_06007.1.9828.seq
# -bsequence dna-align/RBAM_036290___yxxG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06007-RBAM_036290___yxxG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06007-RBAM_036290___yxxG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06007
# 2: RBAM_036290___yxxG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 442
# Identity: 312/442 (70.6%)
# Similarity: 312/442 (70.6%)
# Gaps: 50/442 (11.3%)
# Score: 1106.5
#
#
#=======================================
BSNT_06007 1 ATGGCCAAAATTAAAGACGATTGTCTTGAACTTGAGCTAACACCGAGAAG 50
|||||||||||...|||||.||||||.||||||||..|||||||||||||
RBAM_036290__ 1 ATGGCCAAAATCGGAGACGGTTGTCTGGAACTTGAAATAACACCGAGAAG 50
BSNT_06007 51 GTATCAAGAAATGGATGATGATCCATTTATTTTATCCATATTTGAGTTGT 100
||||||.||...|.|.||||||||||||||.|.|.|.|..|||||..|||
RBAM_036290__ 51 GTATCATGAGGCGAAGGATGATCCATTTATCTCAACAACGTTTGAACTGT 100
BSNT_06007 101 TGGAAAATAAAAAAGCGATCGTTCGCGATTATTCCGCTGTTTTATTAGAG 150
|||||.||||.||||..||||..||||||||.||.||.|||||||||||.
RBAM_036290__ 101 TGGAACATAATAAAGTAATCGCCCGCGATTACTCTGCCGTTTTATTAGAA 150
BSNT_06007 151 AGTGAATATAAATTGCTGATATCTGGAATTGAAACGTTGATAATG--GGA 198
||||||||||||.||||||||||.|..||.|||.|.|| ||.| | ||.
RBAM_036290__ 151 AGTGAATATAAAATGCTGATATCAGATATCGAAGCATT-ATCA-GCAGGC 198
BSNT_06007 199 AATCAAGATATGATAAATTTAGAAACCATTGATCCACTTTTAATTCTCAG 248
||||||||.|.||||..|||||||||.|||||.|||.||||.||.||.||
RBAM_036290__ 199 AATCAAGACAGGATACGTTTAGAAACAATTGAACCATTTTTTATCCTAAG 248
BSNT_06007 249 TATTAATGAAGAAAACGGAAATTACAGCTTTAAGATTAAAATTATACTTG 298
||||.||.|||||||||.|.|||||||.||||..||||.|.||| |.|
RBAM_036290__ 249 TATTGATAAAGAAAACGAACATTACAGATTTATCATTAGATTTA---TGG 295
BSNT_06007 299 AAGGTGATGTTAAGTTTAA--TTC--TAATTTGTTTGAGATTACCTGTAA 344
||..|.|| |.||.|..|| ||| |||.||| |.||||||
RBAM_036290__ 296 AAAATCAT-TCAAATACAACCTTCTATAAATTG---------AACTGTAA 335
BSNT_06007 345 TGAAAAAAAGCTAGAATCCTT--TGCAGATGCTTTAAAAACAAATCTGGA 392
||||.|||||||||||...|| ||.||| ||||||||.||.||||..|
RBAM_036290__ 336 TGAAGAAAAGCTAGAAATTTTCGTGAAGA--CTTTAAAATCAGATCTCAA 383
BSNT_06007 393 AGATGTAAAAAAATCTTCAAAACTTCCCTAA----------- 423
||| ||.|||||||| ||.
RBAM_036290__ 384 AGA-----------CTCCAAAACTT---TATTAGGGAGATAA 411
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