Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06001 and RBAM_036280

See DNA alignment / Visit BSNT_06001 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:30
# Commandline: needle
#    -asequence pep-align/BSNT_06001.1.9828.seq
#    -bsequence pep-align/RBAM_036280___yxiG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06001-RBAM_036280___yxiG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06001-RBAM_036280___yxiG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06001
# 2: RBAM_036280___yxiG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 135
# Identity:      47/135 (34.8%)
# Similarity:    70/135 (51.9%)
# Gaps:           7/135 ( 5.2%)
# Score: 182.5
# 
#
#=======================================

BSNT_06001         1 MNNPIQKHL--IDSEFTILKTDFQFFKKEFILYLEMDTKGKKQQHRILFK     48
                     |...|.:.:  ||....:|..||..||||..|.:::.....:..|.|||:
RBAM_036280__      1 MYKTINEWVDYIDGGCAVLHFDFHVFKKELSLKIQVVENKAECTHNILFQ     50

BSNT_06001        49 NVSSLFFYAG-KESSLKDVAYGE-KWILNSFSYYPKGIGTLYHPLIEDYE     96
                     |.:|::|.|. .:..|:.:...| .|.:...||:|:|||.|.:.:|.:|:
RBAM_036280__     51 NAASVYFSADIGDMRLEKIDPEEYNWQVFEMSYHPEGIGNLSNAVIPEYQ    100

BSNT_06001        97 SNANVLIGINQAVYAVETERVFFDSTEIYAST---    128
                     ||||.||.:|..:.|||.|.|.|.....||..   
RBAM_036280__    101 SNANFLINMNSMLIAVEAETVRFHDQSFYAYHPKS    135


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