Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05991 and RBAM_036270

See DNA alignment / Visit BSNT_05991 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:30
# Commandline: needle
#    -asequence pep-align/BSNT_05991___yxiK.1.9828.seq
#    -bsequence pep-align/RBAM_036270___yxiK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05991___yxiK-RBAM_036270___yxiK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05991___yxiK-RBAM_036270___yxiK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05991___yxiK
# 2: RBAM_036270___yxiK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 162
# Identity:      52/162 (32.1%)
# Similarity:    89/162 (54.9%)
# Gaps:          15/162 ( 9.3%)
# Score: 233.0
# 
#
#=======================================

BSNT_05991___      1 ------MEITSISSIGNLDMVDLKPDQIVMSCELEDAESFYRVWQGLAYE     44
                           ::..|:.:|||||:::......:.||:|...::|.::...|.:|
RBAM_036270__      1 MNTPLNLQKESLRAIGNLDVINPLKYNSIYSCDLVSKDTFSQLMNDLEFE     50

BSNT_05991___     45 RIMIQVITTGSFIEDLSKYFEGYAYKVTKLAKREFHFQSVLQK----ADR     90
                     ..:|:|:...||||:..|..|.....:..::|:..|.:.||.|    ||.
RBAM_036270__     51 TALIEVMAFPSFIEEWKKKVEKKIIHMNTVSKKFIHIECVLTKEQLMADH    100

BSNT_05991___     91 DIAGFLFLLASINDDVFLITDPQPDKSY--FSDGKLQCLTDSGERIMWFE    138
                      :...|:.||||||.|.:|.:|..:|||  .:..|:...|::.|:|:|||
RBAM_036270__    101 -LLDELYFLASINDFVVIIANPAKNKSYMNLNTQKVDVTTENNEKIIWFE    149

BSNT_05991___    139 YDAVDIYMVGGN    150
                     |||.|:|::.  
RBAM_036270__    150 YDAADLYIID--    159


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.