Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05991 and RBAM_036270
See
Amino acid alignment /
Visit
BSNT_05991 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:30
# Commandline: needle
# -asequence dna-align/BSNT_05991___yxiK.1.9828.seq
# -bsequence dna-align/RBAM_036270___yxiK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05991___yxiK-RBAM_036270___yxiK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05991___yxiK-RBAM_036270___yxiK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05991___yxiK
# 2: RBAM_036270___yxiK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 567
# Identity: 278/567 (49.0%)
# Similarity: 278/567 (49.0%)
# Gaps: 201/567 (35.4%)
# Score: 557.5
#
#
#=======================================
BSNT_05991___ 1 ATGGAAATAAC-CTC---------TATAAGCAG-------------TATC 27
||| ||| ||| ||.||..|| |||.
RBAM_036270__ 1 ATG-----AACACTCCTTTAAATTTACAAAAAGAATCATTGAGGGCTATA 45
BSNT_05991___ 28 GGAAATTTAGATATGGTCGATC----TAAAGCCTGACCAAATT---GTTA 70
||.|||.|.|||.||.|..||| ||||..| |||| .|||
RBAM_036270__ 46 GGGAATCTGGATGTGATTAATCCGCTTAAATAC------AATTCGATTTA 89
BSNT_05991___ 71 TGTCGTGTGAACT------TGAAGATGCAGAGTCGTTTTATC-GTGTATG 113
| ||.|||||.|| |.||||| .|.||||.|| .|..|||
RBAM_036270__ 90 T-TCATGTGATCTAGTGAGTAAAGAT------ACTTTTTCTCAATTAATG 132
BSNT_05991___ 114 GCAAGGGCTTGCCTATGAGCGAATTATGATACAGGT------GA--TAAC 155
||.|.||| .||||| .||.||||.| || |||
RBAM_036270__ 133 --AATGACTT---------AGAATT-CGAAACAGCTCTAATAGAAGTAA- 169
BSNT_05991___ 156 GACTGG-------TTCATTTATAGAAGACCTATCCAAGTACTTTGAAGGT 198
||| |||.|||||.||||| ||..|||.| ||||||
RBAM_036270__ 170 ---TGGCATTCCCTTCTTTTATTGAAGA---ATGGAAGAA----GAAGGT 209
BSNT_05991___ 199 T---------ATGCTTACAAGGTGACGAA-GCTG--GCGAAACGAGAATT 236
| || |.|||| .|.||| .||| .||||| ||.|
RBAM_036270__ 210 TGAAAAGAAAAT-CATACA----TATGAATACTGTATCGAAA----AAGT 250
BSNT_05991___ 237 TCATT----TTCAATCTGTATTACAGAAA------------GCAGACCGG 270
||||| ||.|||.|||..||...||| |||||.|
RBAM_036270__ 251 TCATTCATATTGAATGTGTCCTAACCAAAGAACAATTGATGGCAGATC-- 298
BSNT_05991___ 271 GAC--ATTGCAGGCTTTCTCTTTCTGTTAGCTTCTATTAATGACGATGTT 318
|| |||..|.|..||.|.|| |.|||||.||.||.||||||..|||.
RBAM_036270__ 299 -ACTTATTAGATGAATTATATT--TTTTAGCATCGATCAATGACTTTGTA 345
BSNT_05991___ 319 TTTCTGATCACTGATCCT--CAACCGGATAAAAGCTATTTTTCCGATGGG 366
.||.|.||..|..|.||| ||| |.|.||| |||.|...|
RBAM_036270__ 346 GTTATAATAGCAAACCCTGCCAA----AAATAAG-------TCCTACATG 384
BSNT_05991___ 367 AAGCTCCAATGCCT-AACAGACTCAGGCGAACGG---------------- 399
|| ||| ||| ||||| ||.||
RBAM_036270__ 385 AA---------CCTGAAC--ACTCA----AAAGGTTGATGTTACTACTGA 419
BSNT_05991___ 400 -------------ATCATGTGGTTTGAATATGATGCTGTTGACATTTATA 436
|||||.|||||||||||.|||||.|..||..|.||||
RBAM_036270__ 420 AAATAATGAAAAAATCATTTGGTTTGAATACGATGCAGCAGATTTATATA 469
BSNT_05991___ 437 TGGTTGGCGGTAACTAA 453
|..||| |.|||
RBAM_036270__ 470 TCATTG------ATTAA 480
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.