Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05998 and RBAM_036260

See DNA alignment / Visit BSNT_05998 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:30
# Commandline: needle
#    -asequence pep-align/BSNT_05998___yxiI.1.9828.seq
#    -bsequence pep-align/RBAM_036260___yxiI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05998___yxiI-RBAM_036260___yxiI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05998___yxiI-RBAM_036260___yxiI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05998___yxiI
# 2: RBAM_036260___yxiI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 162
# Identity:      87/162 (53.7%)
# Similarity:   110/162 (67.9%)
# Gaps:           9/162 ( 5.6%)
# Score: 480.5
# 
#
#=======================================

BSNT_05998___      1 MMNWRALSQTKQDRIWSEVNKLIKWKPGSRCHHIIPPDPYRVFDISSAMS     50
                      |||..||:.:.:|:|..||:.:||||||....:.||.|::|||:|.   
RBAM_036260__      1 -MNWHGLSEEETERLWRRVNRAVKWKPGSIFASMKPPKPFQVFDVSQ---     46

BSNT_05998___     51 SKAGHNDVSGVLSDLETSILKAFQLGTGKNDVMYALDWQHDGYTFSPHQA    100
                        |.|.: |.|.|.|..||||||..|.|::.||||||||:.|.|:||..
RBAM_036260__     47 ---GFNGI-GFLEDAEMQILKAFQSCTLKHEFMYALDWQHECYLFNPHVP     92

BSNT_05998___    101 MPKDEFGEWPVPVFPNGDYYFFFHQDFSWGLLGDPWKLTITVFGEELLEA    150
                     :.|||||||.|||.|||||.||.||:|.|||||||.:.|||:||..|:.|
RBAM_036260__     93 IDKDEFGEWLVPVIPNGDYCFFIHQEFQWGLLGDPRQQTITIFGSPLIRA    142

BSNT_05998___    151 IDHDPPILFQNR    162
                     |:.:.|:|||. 
RBAM_036260__    143 IERNAPVLFQK-    153


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