Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05990 and RBAM_036230

See DNA alignment / Visit BSNT_05990 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:29
# Commandline: needle
#    -asequence pep-align/BSNT_05990.1.9828.seq
#    -bsequence pep-align/RBAM_036230.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05990-RBAM_036230.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05990-RBAM_036230.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05990
# 2: RBAM_036230
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 132
# Identity:      52/132 (39.4%)
# Similarity:    66/132 (50.0%)
# Gaps:          24/132 (18.2%)
# Score: 241.0
# 
#
#=======================================

BSNT_05990         1 MNITQYEKLKKH-------LSDADTGPFTLNEFSFYMKEDDRYIHIPVFE     43
                             :::|       |.....|.|.|.||:||...::.|..|||||
RBAM_036230        1 --------MERHKHEKAVLLGPDSPGCFELTEFTFYTGYNEFYDKIPVFE     42

BSNT_05990        44 LKLSAQTCDIHLRFEDVSASKLDDLESIDSVALEIVPTDDQWERLRYYVY     93
                     |||:....|..||||.|.|::|||||||..:.|:|.|.|..||.:||||.
RBAM_036230       43 LKLTDGQYDAVLRFEGVRAARLDDLESITDIHLDISPVDGGWESIRYYVD     92

BSNT_05990        94 DEENQISFYCGGWDVIKCDKKSH---------    116
                     |.|..:||||..|.|:...||..         
RBAM_036230       93 DGEGSMSFYCAKWVVLDMKKKQSPEWPGKTSG    124


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