Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05982 and RBAM_036200

See DNA alignment / Visit BSNT_05982 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:29
# Commandline: needle
#    -asequence pep-align/BSNT_05982___licT.1.9828.seq
#    -bsequence pep-align/RBAM_036200___licT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05982___licT-RBAM_036200___licT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05982___licT-RBAM_036200___licT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05982___licT
# 2: RBAM_036200___licT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 277
# Identity:     258/277 (93.1%)
# Similarity:   268/277 (96.8%)
# Gaps:           2/277 ( 0.7%)
# Score: 1329.0
# 
#
#=======================================

BSNT_05982___      1 MKIAKVINNNVISVVNEQGKELVVMGRGLAFQKKSGDDVDEARIEKVFTL     50
                     |||||||||||:||:.|..:|||:||||:|||||:||.||||||||||||
RBAM_036200__      1 MKIAKVINNNVVSVLKEGNQELVIMGRGIAFQKKTGDPVDEARIEKVFTL     50

BSNT_05982___     51 DNKDVSEKFKTLLYDIPIECMEVSEEIISYAKLQLGKKLNDSIYVSLTDH    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036200__     51 DNKDVSEKFKTLLYDIPIECMEVSEEIISYAKLQLGKKLNDSIYVSLTDH    100

BSNT_05982___    101 INFAIQRNQKGLDIKNALLWETKRLYKDEFAIGKEALVMVKNKTGVSLPE    150
                     ||||||||:|||||||||||||||||||||||||:||.||||||||||||
RBAM_036200__    101 INFAIQRNKKGLDIKNALLWETKRLYKDEFAIGKQALAMVKNKTGVSLPE    150

BSNT_05982___    151 DEAGFIALHIVNAELNEEMPNIINITKVMQEILSIVKYHFKIEFNEESLH    200
                     ||||||||||||||||||||||||||||||||||||||||||:|||||||
RBAM_036200__    151 DEAGFIALHIVNAELNEEMPNIINITKVMQEILSIVKYHFKIDFNEESLH    200

BSNT_05982___    201 YYRFVTHLKFFAQRLFNGTHMESQDDFLLDTVKEKYHRAYECTKKIQTYI    250
                     |||||||||||||||||||||||||||||:||||||||||||||||||.|
RBAM_036200__    201 YYRFVTHLKFFAQRLFNGTHMESQDDFLLETVKEKYHRAYECTKKIQTCI    250

BSNT_05982___    251 EREYEHKLTSDELLYLTIHIERVVKQA    277
                     ||.||||||||||||||||||||||  
RBAM_036200__    251 ERAYEHKLTSDELLYLTIHIERVVK--    275


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