Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05976 and RBAM_036160

See DNA alignment / Visit BSNT_05976 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:28
# Commandline: needle
#    -asequence pep-align/BSNT_05976___yxiS.1.9828.seq
#    -bsequence pep-align/RBAM_036160___yxiS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05976___yxiS-RBAM_036160___yxiS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05976___yxiS-RBAM_036160___yxiS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05976___yxiS
# 2: RBAM_036160___yxiS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 102
# Identity:      68/102 (66.7%)
# Similarity:    79/102 (77.5%)
# Gaps:           6/102 ( 5.9%)
# Score: 359.0
# 
#
#=======================================

BSNT_05976___      1 -----MNEKQLAEAYERDENMMILVFAQWCVNHDLDPMELYAKAYPQQKL     45
                          ..||||.|.|.||||||||||||||||||||||.:|::|||.|.|
RBAM_036160__      1 MIVKPFTEKQLEEYYRRDENMMILVFAQWCVNHDLDPMAIYSRAYPGQPL     50

BSNT_05976___     46 NESLKKTMDDLVVPKHEAEHIPDQTVIAVLEMFGNTDLAQAVHEAISGRK     95
                     ||.|:||.::|||||.|:|.|||||||.|||||||:|||:||:.||:.|.
RBAM_036160__     51 NEELRKTAEELVVPKEESEPIPDQTVIGVLEMFGNSDLAEAVYAAIAQRP    100

BSNT_05976___     96 Q-     96
                     . 
RBAM_036160__    101 SR    102


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