Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05958 and RBAM_036100

See DNA alignment / Visit BSNT_05958 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:27
# Commandline: needle
#    -asequence pep-align/BSNT_05958.1.9828.seq
#    -bsequence pep-align/RBAM_036100___yxjJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05958-RBAM_036100___yxjJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05958-RBAM_036100___yxjJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05958
# 2: RBAM_036100___yxjJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 56
# Identity:      40/56 (71.4%)
# Similarity:    44/56 (78.6%)
# Gaps:           1/56 ( 1.8%)
# Score: 179.0
# 
#
#=======================================

BSNT_05958         1 MILFIIIALCGYLLFSFSKDNRRKPQKTSPLPAAAPHHNNLIDLDAIRQK     50
                     |:|.|..||.|||:||||||||||..|||||..|| ..||:|||:|||||
RBAM_036100__      1 MMLLIFAALTGYLVFSFSKDNRRKTPKTSPLVTAA-DTNNIIDLNAIRQK     49

BSNT_05958        51 RRMHLS     56
                     |||.||
RBAM_036100__     50 RRMPLS     55


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