Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05958 and RBAM_036100

See Amino acid alignment / Visit BSNT_05958 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:27
# Commandline: needle
#    -asequence dna-align/BSNT_05958.1.9828.seq
#    -bsequence dna-align/RBAM_036100___yxjJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05958-RBAM_036100___yxjJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05958-RBAM_036100___yxjJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05958
# 2: RBAM_036100___yxjJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 182
# Identity:     125/182 (68.7%)
# Similarity:   125/182 (68.7%)
# Gaps:          25/182 (13.7%)
# Score: 437.0
# 
#
#=======================================

BSNT_05958         1 ATGATCCTATTTATTATCATCGCATTATGC-------GGCTATCTTCTTT     43
                     |||||.|||.|||||.|       |..|||       ||.||||||.|||
RBAM_036100__      1 ATGATGCTACTTATTTT-------TGCTGCTTTGACAGGGTATCTTGTTT     43

BSNT_05958        44 TTTCTTTCAGCAAGGACAATCGCCGCAAACCGCAAAAGACAAGCCCTC--     91
                     |.||||||||.||||||||.|||||.|||.|||.||||||||||||.|  
RBAM_036100__     44 TCTCTTTCAGTAAGGACAACCGCCGGAAAACGCCAAAGACAAGCCCGCTG     93

BSNT_05958        92 -TGCCAGCAGCCG-CACCTCATCACAACAACCTAATCGACCTTGACGCCA    139
                      ||.||||.|||| |||       .||.|||.|.||.||..|..|.||.|
RBAM_036100__     94 GTGACAGCTGCCGACAC-------GAATAACATCATTGATTTAAATGCGA    136

BSNT_05958       140 TCCGCCAAAAACGCCGGATGCATCTTTCCTAA    171
                     ||||.||||||||||||||||..||.||.|||
RBAM_036100__    137 TCCGTCAAAAACGCCGGATGCCGCTATCATAA    168


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