Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05958 and RBAM_036100
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:27
# Commandline: needle
# -asequence dna-align/BSNT_05958.1.9828.seq
# -bsequence dna-align/RBAM_036100___yxjJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05958-RBAM_036100___yxjJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05958-RBAM_036100___yxjJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05958
# 2: RBAM_036100___yxjJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 182
# Identity: 125/182 (68.7%)
# Similarity: 125/182 (68.7%)
# Gaps: 25/182 (13.7%)
# Score: 437.0
#
#
#=======================================
BSNT_05958 1 ATGATCCTATTTATTATCATCGCATTATGC-------GGCTATCTTCTTT 43
|||||.|||.|||||.| |..||| ||.||||||.|||
RBAM_036100__ 1 ATGATGCTACTTATTTT-------TGCTGCTTTGACAGGGTATCTTGTTT 43
BSNT_05958 44 TTTCTTTCAGCAAGGACAATCGCCGCAAACCGCAAAAGACAAGCCCTC-- 91
|.||||||||.||||||||.|||||.|||.|||.||||||||||||.|
RBAM_036100__ 44 TCTCTTTCAGTAAGGACAACCGCCGGAAAACGCCAAAGACAAGCCCGCTG 93
BSNT_05958 92 -TGCCAGCAGCCG-CACCTCATCACAACAACCTAATCGACCTTGACGCCA 139
||.||||.|||| ||| .||.|||.|.||.||..|..|.||.|
RBAM_036100__ 94 GTGACAGCTGCCGACAC-------GAATAACATCATTGATTTAAATGCGA 136
BSNT_05958 140 TCCGCCAAAAACGCCGGATGCATCTTTCCTAA 171
||||.||||||||||||||||..||.||.|||
RBAM_036100__ 137 TCCGTCAAAAACGCCGGATGCCGCTATCATAA 168
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