Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05947 and RBAM_036060

See DNA alignment / Visit BSNT_05947 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:27
# Commandline: needle
#    -asequence pep-align/BSNT_05947___yxkD.1.9828.seq
#    -bsequence pep-align/RBAM_036060___yxkD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05947___yxkD-RBAM_036060___yxkD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05947___yxkD-RBAM_036060___yxkD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05947___yxkD
# 2: RBAM_036060___yxkD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     253/278 (91.0%)
# Similarity:   265/278 (95.3%)
# Gaps:           0/278 ( 0.0%)
# Score: 1291.0
# 
#
#=======================================

BSNT_05947___      1 MKKRMLDVLMLVIGAFFFALAVNLFAIPNDLGEGGVTGITLILYYLFQWS     50
                     ||||:||||||:||||.||||||||||||||||||||||||||||:|:||
RBAM_036060__      1 MKKRLLDVLMLIIGAFIFALAVNLFAIPNDLGEGGVTGITLILYYVFEWS     50

BSNT_05947___     51 PGVTNFILNAFLLLIGYKFLDGKTTVYTIIAVAANSLFLHLTHGWSIPSD    100
                     |||||.|||..||:|||||||||||:||||.|.||||||||||.|..||.
RBAM_036060__     51 PGVTNIILNGILLIIGYKFLDGKTTLYTIITVVANSLFLHLTHDWHSPSH    100

BSNT_05947___    101 ELIINTIFAGVFAGVGIGMIIRVGGTTAGSAILARIANKYLDWNISYALL    150
                     ||||||||||||||||||:|||||||||||||||||||||||||||||||
RBAM_036060__    101 ELIINTIFAGVFAGVGIGIIIRVGGTTAGSAILARIANKYLDWNISYALL    150

BSNT_05947___    151 FFDLIVVFSSYFIIGAEKMMFTIVMLYIGTKVMDFIIEGLNTKKAITVIS    200
                     |||||||||||||||||||||||||||||||||||||||||||||:|:||
RBAM_036060__    151 FFDLIVVFSSYFIIGAEKMMFTIVMLYIGTKVMDFIIEGLNTKKAVTIIS    200

BSNT_05947___    201 ENKSEIAEQVNTLMDRGVTILSGKGNYTGQSKEILYIVINKQELSMLKKI    250
                     |:|.|||||||||||||||:|||||||||||||||||||.||||||||||
RBAM_036060__    201 EHKHEIAEQVNTLMDRGVTLLSGKGNYTGQSKEILYIVIQKQELSMLKKI    250

BSNT_05947___    251 IRSCDKKAFVIVHDVRDVFGEGFVDISK    278
                     |:|||.||||||||||||||||||||||
RBAM_036060__    251 IKSCDTKAFVIVHDVRDVFGEGFVDISK    278


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