Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05945 and RBAM_036050

See DNA alignment / Visit BSNT_05945 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:27
# Commandline: needle
#    -asequence pep-align/BSNT_05945___yxkF.1.9828.seq
#    -bsequence pep-align/RBAM_036050___yxkF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05945___yxkF-RBAM_036050___yxkF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05945___yxkF-RBAM_036050___yxkF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05945___yxkF
# 2: RBAM_036050___yxkF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     155/297 (52.2%)
# Similarity:   204/297 (68.7%)
# Gaps:           0/297 ( 0.0%)
# Score: 807.0
# 
#
#=======================================

BSNT_05945___      1 MKSLLAIYPGSIVSEELCIREGCLCFFDESNQRYISIPKTEISEKEVLVL     50
                     |..||||||.:::|:..|..|...||:||..:.|::|||.:|:.||.|:|
RBAM_036050__      1 MNPLLAIYPRAVLSDTCCTAEDVFCFYDEKRRVYVAIPKEDITPKEKLLL     50

BSNT_05945___     51 QSFLTPADEGNQLSMKSPEENKWFSFLFSRGELPAYIKKRTRFVHFHLFG    100
                     :|.||||:|......::....:|..||...|.:|...:.|.||:|:.|.|
RBAM_036050__     51 ESLLTPAEEKGDFFPETAAAKRWRRFLLEEGPVPDVKELRVRFIHYDLLG    100

BSNT_05945___    101 KIERTSFTEAVRHFWPVSFVIVWIHEDRGVIVEQESEAAAKKGELESLAK    150
                     :.:..:||||:|||||||:.:|....|:|||||:|...|....::.|..|
RBAM_036050__    101 ERDWGAFTEALRHFWPVSYTVVRTGRDQGVIVEEEKLEAPDSDDIASFVK    150

BSNT_05945___    151 VLESDFYFSVRFYAGRFYEPDECLRKHYTREQAYFLFAEKRLPQVQSVTF    200
                     :||.||||||||:.||:|...|.||.||.|||.|.....:.|||:.::|.
RBAM_036050__    151 ILEGDFYFSVRFFIGRYYGAGERLRLHYRREQQYCQIGRRYLPQLSTLTA    200

BSNT_05945___    201 EMIFPFLLLETEKEKLETLLSEEAELLFGSEAELRKTIKLFIENNSNVTL    250
                     |.:||.:|.|..:|||..||.|||.|||..|.||:.||:.|||:|||::|
RBAM_036050__    201 ETVFPAMLTEESREKLSALLHEEAVLLFQKEPELKHTIQTFIEHNSNMSL    250

BSNT_05945___    251 TAKKLHLHRNSLQYRIDKFIERSGIDIKSYKGALLAYFICLQNESSE    297
                     |:|:|||||||||||||||.||||||||:|:|||||||||||.|.|.
RBAM_036050__    251 TSKRLHLHRNSLQYRIDKFAERSGIDIKTYRGALLAYFICLQYEKSH    297


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