Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05943 and RBAM_036040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:27
# Commandline: needle
# -asequence pep-align/BSNT_05943___msmX.1.9828.seq
# -bsequence pep-align/RBAM_036040___msmX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05943___msmX-RBAM_036040___msmX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05943___msmX-RBAM_036040___msmX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05943___msmX
# 2: RBAM_036040___msmX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity: 334/366 (91.3%)
# Similarity: 352/366 (96.2%)
# Gaps: 1/366 ( 0.3%)
# Score: 1718.0
#
#
#=======================================
BSNT_05943___ 1 MAELRMEHIYKFYDQKEPAVDDFNLHIADKEFIVFVGPSGCGKSTTLRMV 50
|||||:|||||:|||||.|||||||||.||||||||||||||||||||||
RBAM_036040__ 1 MAELRLEHIYKYYDQKEAAVDDFNLHIKDKEFIVFVGPSGCGKSTTLRMV 50
BSNT_05943___ 51 AGLEEISKGDFYIEGKRVNDVAPKDRDIAMVFQNYALYPHMTVYDNIAFG 100
||||:|::|||||...||||:|||||||||||||||||||||||||||||
RBAM_036040__ 51 AGLEDITRGDFYIGDTRVNDIAPKDRDIAMVFQNYALYPHMTVYDNIAFG 100
BSNT_05943___ 101 LKLRKMPKPEIKKRVEEAAKILGLEEYLHRKPKALSGGQRQRVALGRAIV 150
||||||||||||||||||||:|||.|||||||||||||||||||||||||
RBAM_036040__ 101 LKLRKMPKPEIKKRVEEAAKMLGLTEYLHRKPKALSGGQRQRVALGRAIV 150
BSNT_05943___ 151 RDAKVFLMDEPLSNLDAKLRVQMRAEIIKLHQRLQTTTIYVTHDQTEALT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036040__ 151 RDAKVFLMDEPLSNLDAKLRVQMRAEIIKLHQRLQTTTIYVTHDQTEALT 200
BSNT_05943___ 201 MATRIVVMKDGKIQQIGTPKDVYEFPENVFVGGFIGSPAMNFFKGKLTDG 250
||||||||||||||||||||||||.|||||||||||||||||||||||||
RBAM_036040__ 201 MATRIVVMKDGKIQQIGTPKDVYEHPENVFVGGFIGSPAMNFFKGKLTDG 250
BSNT_05943___ 251 LIKIGSAALTVPEGKMKVLREKGYIGKEVIFGIRPEDIHDELIVVESYKN 300
.|:||||||:|||||||:||||||.||:||||||||||||||||||||||
RBAM_036040__ 251 AIQIGSAALSVPEGKMKMLREKGYAGKDVIFGIRPEDIHDELIVVESYKN 300
BSNT_05943___ 301 SSIKAKINVAELLGSEIMIYSQIDNQDFIARIDARLDIQSGDELTVAFDM 350
|||.||||||||||||||:||:|.:||||||||||.||::|:||||||||
RBAM_036040__ 301 SSITAKINVAELLGSEIMVYSRIGDQDFIARIDARHDIRAGEELTVAFDM 350
BSNT_05943___ 351 NKGHFFDSETEVRIR- 365
||.||||||||:|||
RBAM_036040__ 351 NKAHFFDSETEIRIRS 366
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