Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05940 and RBAM_036030

See DNA alignment / Visit BSNT_05940 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:27
# Commandline: needle
#    -asequence pep-align/BSNT_05940___yxkH.1.9828.seq
#    -bsequence pep-align/RBAM_036030___yxkH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05940___yxkH-RBAM_036030___yxkH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05940___yxkH-RBAM_036030___yxkH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05940___yxkH
# 2: RBAM_036030___yxkH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     200/281 (71.2%)
# Similarity:   241/281 (85.8%)
# Gaps:           3/281 ( 1.1%)
# Score: 1053.0
# 
#
#=======================================

BSNT_05940___      1 MKRLFLSIFLLGSCLALAACADQEANAEQPMPKAEQKKPEKKAVQVQ-KK     49
                     |||:.:.:.||.:...||||:..||:|||.:||||... :||:|:.| ||
RBAM_036030__      1 MKRMIMCMCLLAAVFTLAACSGHEASAEQSIPKAEAHH-DKKSVKRQIKK     49

BSNT_05940___     50 EDDTSAWIKTEKPAKLPILMYHSISSGNSLRVPKKEFEAHMKWLHDNGYQ     99
                     |.|||||::|:..|:||||||||||.||||||||:||..|||||||:||.
RBAM_036030__     50 EPDTSAWVQTKGTARLPILMYHSISEGNSLRVPKEEFRQHMKWLHDHGYY     99

BSNT_05940___    100 TLTPKEAYLMLTQDKKPSEKCVLITFDDGYTDNYQDAYPVLKKYGMKATI    149
                     |:||:|||||||:||:|.|||||||||||||||.:.|||:||||.|||||
RBAM_036030__    100 TMTPEEAYLMLTEDKEPREKCVLITFDDGYTDNVKAAYPILKKYKMKATI    149

BSNT_05940___    150 FMIGKSIGHRHHLTEDQMKEMAQHGISIESHTIDHVELNGLTPQQQQSEM    199
                     ||||..|||::||||.||||||.|||||:|||::|:||||||||||:.||
RBAM_036030__    150 FMIGNYIGHKNHLTEKQMKEMAAHGISIQSHTMNHLELNGLTPQQQRREM    199

BSNT_05940___    200 ADSKKLFDHMFHQQTTIISYPVGRYNEETLKAAEKTGYQMGVTTEPGAAS    249
                     .|||:|||.||.|:|::|||||||||:||||||..:||:|.|||||||||
RBAM_036030__    200 KDSKRLFDQMFGQRTSMISYPVGRYNKETLKAAAASGYRMAVTTEPGAAS    249

BSNT_05940___    250 RDQGMYALHRVRVSPGMSGSAFGAYIES-MK    279
                     ||||:|.||||||||||||:|||:||:: ||
RBAM_036030__    250 RDQGLYGLHRVRVSPGMSGAAFGSYIQNVMK    280


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