Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05930 and RBAM_035990

See DNA alignment / Visit BSNT_05930 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:26
# Commandline: needle
#    -asequence pep-align/BSNT_05930___cydC.1.9828.seq
#    -bsequence pep-align/RBAM_035990___cydC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05930___cydC-RBAM_035990___cydC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05930___cydC-RBAM_035990___cydC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05930___cydC
# 2: RBAM_035990___cydC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 567
# Identity:     481/567 (84.8%)
# Similarity:   521/567 (91.9%)
# Gaps:           0/567 ( 0.0%)
# Score: 2457.0
# 
#
#=======================================

BSNT_05930___      1 MGKDLFRYKGMKRILTLITCLTLIQTAAIIMQAEWLSEALTGLFNGKGIT     50
                     ||||||.||||||||.:||.||:|||||||:||||||:|:|||||||.|.
RBAM_035990__      1 MGKDLFLYKGMKRILAIITGLTIIQTAAIILQAEWLSQAVTGLFNGKRIA     50

BSNT_05930___     51 SLFPVISFFLIAFIARHGVTVARQKIVYQYAARTGADLRKSFLDQLFRLG    100
                     ||:|||.|||:||:.||.||..||||||||||:|||||||.||:||||||
RBAM_035990__     51 SLYPVIGFFLLAFLVRHAVTTVRQKIVYQYAAQTGADLRKRFLEQLFRLG    100

BSNT_05930___    101 PRFAKKEGTGQMVTLAMEGISQFRRYLELFLPKMVSMAIVPAAVVIYVFF    150
                     ||||||||||:|||||||||||||||||||||||||||||||||||||||
RBAM_035990__    101 PRFAKKEGTGRMVTLAMEGISQFRRYLELFLPKMVSMAIVPAAVVIYVFF    150

BSNT_05930___    151 QDRTSAIILVAAMPILIIFMILLGLVAQRKADRQWKSYQRLSNHFVDSLR    200
                     ||:|||:||:.|:||||:||||||||||:||||||||||.||||||||||
RBAM_035990__    151 QDKTSALILILALPILIVFMILLGLVAQKKADRQWKSYQTLSNHFVDSLR    200

BSNT_05930___    201 GLETLRFLGLSKSHSKNIFYVSERYRKATMSTLRVAFLSSFALDFFTMLS    250
                     |||||||||||||||||||:||||||||||||||||||||||||||||||
RBAM_035990__    201 GLETLRFLGLSKSHSKNIFHVSERYRKATMSTLRVAFLSSFALDFFTMLS    250

BSNT_05930___    251 VATVAVFLGLRLIDGDILLGPALTALILAPEYFLPVREVGNDYHATLNGQ    300
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
RBAM_035990__    251 VATVAVFLGLRLIDGQILLGPALTALILAPEYFLPVREVGNDYHATLNGQ    300

BSNT_05930___    301 EAGKTIQEILSQPGFKEETPLQLEDWSDQDELKLSGVSVGRSVSDIHLSF    350
                     |||||||.||:|||||||.||:|:.|:|.|||:|:.:||..|:|:.||||
RBAM_035990__    301 EAGKTIQAILAQPGFKEEKPLELDTWTDGDELQLTRLSVRESMSEFHLSF    350

BSNT_05930___    351 KGKKKIGIIGASGAGKSTLIDILGGFLEPDGGMIEVNGTSRSHLQDGSWQ    400
                     ||||||||||.||||||||||:|||||||..|.|:|||.||||||...||
RBAM_035990__    351 KGKKKIGIIGESGAGKSTLIDVLGGFLEPASGEIKVNGESRSHLQSDGWQ    400

BSNT_05930___    401 KNLLYIPQHPYIFDDTLGNNIRFYHPSASAEDTARAAAAAGLAELVDSLP    450
                     |.|||||||||||||||.||||||||.||.|:||:||.:|||:.|:..||
RBAM_035990__    401 KQLLYIPQHPYIFDDTLLNNIRFYHPDASREETAQAARSAGLSGLIRDLP    450

BSNT_05930___    451 EGLEGRIGEGGRALSGGQAQRVALARAFLGNRPILLLDEPTAHLDIETEY    500
                     .||:||||||||||||||||||||||||||||||||||||||||||||||
RBAM_035990__    451 GGLDGRIGEGGRALSGGQAQRVALARAFLGNRPILLLDEPTAHLDIETEY    500

BSNT_05930___    501 EIKETMLDLFEDKLVFLATHRLHWMLDMDEIIVLDGGRVAEVGTHNELLE    550
                     ||||||.||||:||||||||||||||:||||||||.|.|||:|||:||:.
RBAM_035990__    501 EIKETMKDLFENKLVFLATHRLHWMLEMDEIIVLDDGAVAEIGTHDELMA    550

BSNT_05930___    551 KNGVYTKLVKAQLGERA    567
                     |.|||.||||||||||.
RBAM_035990__    551 KQGVYAKLVKAQLGERT    567


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