Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05929 and RBAM_035980
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:26
# Commandline: needle
# -asequence pep-align/BSNT_05929___cydD.1.9828.seq
# -bsequence pep-align/RBAM_035980___cydD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05929___cydD-RBAM_035980___cydD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05929___cydD-RBAM_035980___cydD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05929___cydD
# 2: RBAM_035980___cydD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 576
# Identity: 469/576 (81.4%)
# Similarity: 520/576 (90.3%)
# Gaps: 1/576 ( 0.2%)
# Score: 2431.0
#
#
#=======================================
BSNT_05929___ 1 MKKEEWILPYIKQNARLFVLVIFLGGVTIFSAAFLMFTSGFLISKAATRP 50
|:||||||||:||||||||||||||.|||||||||||||||||||:||||
RBAM_035980__ 1 MRKEEWILPYMKQNARLFVLVIFLGAVTIFSAAFLMFTSGFLISKSATRP 50
BSNT_05929___ 51 ENILLIYVPIVAVRTFGIARSVSRYVERLVGHHIILKIVSDMRVRLYNML 100
|||||:|||||||||||||||||||.|||.||||||||||||||||||||
RBAM_035980__ 51 ENILLVYVPIVAVRTFGIARSVSRYAERLTGHHIILKIVSDMRVRLYNML 100
BSNT_05929___ 101 EPGALMLRSRFRTGDMLGILSEDIEHLQDAFLKTIFPAISALFLYAVSVI 150
||.:|||.||||||||||||:|||||||||||||||||:|||.|||.|||
RBAM_035980__ 101 EPASLMLSSRFRTGDMLGILAEDIEHLQDAFLKTIFPAVSALLLYAASVI 150
BSNT_05929___ 151 ALGFFSWPFAILLALYLFVLVVLFPVVSLLVTRAKNAKLKSGRNVLYSRL 200
.|||:|||||...|:|||:|||:|||||||||||||.:||||||.|||||
RBAM_035980__ 151 GLGFYSWPFAAFAAIYLFILVVMFPVVSLLVTRAKNMRLKSGRNTLYSRL 200
BSNT_05929___ 201 TDAVMGVSDWMFSGRRHAFIDAYEKEEHDWFELERKKQRFTRWRDFAAQC 250
||||:||||||||||:.|||.:||::|..||:||.|:||||||||.||||
RBAM_035980__ 201 TDAVLGVSDWMFSGRQAAFISSYEEKEKAWFDLESKRQRFTRWRDLAAQC 250
BSNT_05929___ 251 LVAGLILLMLFWTAGQQADGELAKTMIAAFVLVVFPLTEAFLPLSDALGE 300
||.|.||:||||||||.|||.:|.||||||||||||||||||||||||.|
RBAM_035980__ 251 LVGGFILIMLFWTAGQYADGSIANTMIAAFVLVVFPLTEAFLPLSDALTE 300
BSNT_05929___ 301 VPGYQDSIRRMNKVAPQLEASQTESGDQMLDLQDVTLAFRDVTFSYDNSS 350
||.|||||:||::.||:|.:.:.:..|:.||:.||||.|.:||||||..|
RBAM_035980__ 301 VPSYQDSIKRMSQAAPELRSREVKQTDEKLDVSDVTLTFDNVTFSYDQHS 350
BSNT_05929___ 351 QVLHNFSFTLRQGEKMALLGRSGSGKSTSLALIEGALKPDSGSVTLNGVE 400
.||..||||||||||||||||||||||||||||||||.||||.|.|||:|
RBAM_035980__ 351 HVLDRFSFTLRQGEKMALLGRSGSGKSTSLALIEGALVPDSGKVMLNGLE 400
BSNT_05929___ 401 TALLKDQIADAVAVLNQKPHLFDTSILNNIRLGNGEASDEDVRRAAKQVK 450
||.:::||:.||||||||||||:|||:||||||||:||||||:|||:|||
RBAM_035980__ 401 TAAVQEQISSAVAVLNQKPHLFNTSIMNNIRLGNGKASDEDVKRAARQVK 450
BSNT_05929___ 451 LHDYIESLPDGYHTSVQETGIRFSGGERQRIALARILLQDTPIIILDEPT 500
||||||||||||.|||||||||||||||||||||||||||||:|||||||
RBAM_035980__ 451 LHDYIESLPDGYETSVQETGIRFSGGERQRIALARILLQDTPVIILDEPT 500
BSNT_05929___ 501 VGLDPITERELMETVFEVLKGKTILWITHHLAGVEAADKIVFLENGKTEM 550
||||.:|||||::|:|:|.|.||||||||||||||.|||||||||||.||
RBAM_035980__ 501 VGLDAVTERELLDTIFDVFKEKTILWITHHLAGVETADKIVFLENGKAEM 550
BSNT_05929___ 551 EGTHEELLAANERYSRLYHLDVPVK- 575
||||:||||.||||.:||.||||::
RBAM_035980__ 551 EGTHQELLAENERYRKLYRLDVPIRT 576
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