Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05926 and RBAM_035970

See DNA alignment / Visit BSNT_05926 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:26
# Commandline: needle
#    -asequence pep-align/BSNT_05926___yxkO.1.9828.seq
#    -bsequence pep-align/RBAM_035970___yxkO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05926___yxkO-RBAM_035970___yxkO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05926___yxkO-RBAM_035970___yxkO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05926___yxkO
# 2: RBAM_035970___yxkO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     214/276 (77.5%)
# Similarity:   242/276 (87.7%)
# Gaps:           0/276 ( 0.0%)
# Score: 1161.0
# 
#
#=======================================

BSNT_05926___      1 MNVPYWTEEHVRATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGA     50
                     ||:..|||:.|:.|||:|:|:|||||:|||||||||:|||||||||||||
RBAM_035970__      1 MNIMDWTEQDVKDTLPKREADSHKGTFGTALLLAGSEDMPGAALLAGLGA     50

BSNT_05926___     51 MRSGLGKLVIGTSESVIPLIVPVLPEATYWRDGWKKAADAQLEETYRAIA    100
                     ||||:||||||||..|||||||||||||||||||||||..|..||.||.|
RBAM_035970__     51 MRSGVGKLVIGTSAGVIPLIVPVLPEATYWRDGWKKAAAGQPGETIRAAA    100

BSNT_05926___    101 IGPGLPQTESVQQAVDHVLTADCPVILDAGALAKRTYPKREAPVILTPHP    150
                     :|||||||:.||||.|.:|:||.||||||||:.|||||||:|||||||||
RBAM_035970__    101 LGPGLPQTDEVQQAADQLLSADYPVILDAGAITKRTYPKRKAPVILTPHP    150

BSNT_05926___    151 GEFSRMTGMPVNELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCW    200
                     ||||||||:|:.|:|:.||.||.|||.:|...||||||:|:||||||:|.
RBAM_035970__    151 GEFSRMTGLPIQEIQQNRAGYAAEWAERLHVTIVLKGNETIIAFPDGECR    200

BSNT_05926___    201 LNPTGNGALAKGGTGDTLAGMILGMLCCHEDPKHAILNAVYLHGACAELW    250
                     .|.|||||||||||||||.||||||||||:|||||:||||.|||.|||||
RBAM_035970__    201 RNTTGNGALAKGGTGDTLTGMILGMLCCHQDPKHAVLNAVRLHGECAELW    250

BSNT_05926___    251 TDEHSAHTLLAHELSDILPRVWKRFE    276
                     |.|.|||||||||||::||||||.:|
RBAM_035970__    251 TKERSAHTLLAHELSELLPRVWKEYE    276


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