Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05923 and RBAM_035960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:26
# Commandline: needle
# -asequence pep-align/BSNT_05923___yxlA.1.9828.seq
# -bsequence pep-align/RBAM_035960___yxlA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05923___yxlA-RBAM_035960___yxlA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05923___yxlA-RBAM_035960___yxlA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05923___yxlA
# 2: RBAM_035960___yxlA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 457
# Identity: 399/457 (87.3%)
# Similarity: 434/457 (95.0%)
# Gaps: 5/457 ( 1.1%)
# Score: 2108.0
#
#
#=======================================
BSNT_05923___ 1 MKVERRTIEYIPNEERHGKAKDLFPVWFGANMHITTLVTGTIPVAMGLNL 50
|||||||||:||::|||||||||||||||||||||||||||:||.|||:|
RBAM_035960__ 1 MKVERRTIEHIPHDERHGKAKDLFPVWFGANMHITTLVTGTLPVTMGLDL 50
BSNT_05923___ 51 FWSVAAIICGTLIGAIFMASHSAQGPQLGIPQMIQSRAQFGVIGAILPLF 100
|||:||||.||.||||||||||||||||||||||||||||||||||||||
RBAM_035960__ 51 FWSIAAIIIGTFIGAIFMASHSAQGPQLGIPQMIQSRAQFGVIGAILPLF 100
BSNT_05923___ 101 LVMFIYLGFFASSTILAAGTLSSFVPIPGTWSIIGLSAVCFLLTIFGHDL 150
||||||||||||||||||||||||||||.:|.||||||:||||||:||||
RBAM_035960__ 101 LVMFIYLGFFASSTILAAGTLSSFVPIPASWCIIGLSAICFLLTIYGHDL 150
BSNT_05923___ 151 IHKMQKILSWTSFAVFFAATILIFQLPIPAGSWIPGAIDLPIFLVAVSAV 200
|||||||||||||||||||||||||||||:|||:||::|||:||||||||
RBAM_035960__ 151 IHKMQKILSWTSFAVFFAATILIFQLPIPSGSWVPGSLDLPVFLVAVSAV 200
BSNT_05923___ 201 ATWQLAYAPYVADYSRYLPVKTPASKTFWYSYAGTSVSSIWMMLLGALLT 250
|||||||||||||||||||||||||.|||||||||||||||||||||:||
RBAM_035960__ 201 ATWQLAYAPYVADYSRYLPVKTPASHTFWYSYAGTSVSSIWMMLLGAILT 250
BSNT_05923___ 251 TSLPDFTANSGSQIVQLFGPFSFIMLIIVLFGQMAINVFNLYGAFMSTTT 300
|:||:||:|:|::||:||||||||||||||||||||||||||||||||||
RBAM_035960__ 251 TALPEFTSNAGNEIVRLFGPFSFIMLIIVLFGQMAINVFNLYGAFMSTTT 300
BSNT_05923___ 301 TLEPFLKLKVTPKVRIIMILGVTLVGTVLSLLGQSNFMELFLNFIFFISY 350
|||||||||||||.|::|||.||..|||||||||||||||||||||||||
RBAM_035960__ 301 TLEPFLKLKVTPKTRVVMILCVTAAGTVLSLLGQSNFMELFLNFIFFISY 350
BSNT_05923___ 351 FLIPWTAINLVDYYFVRHGKYQVKAMFDVNGPYGKVNWITTIAFVLSILL 400
|||||||||||||||:|.|||.||:||||||.||:|||||..||||||:|
RBAM_035960__ 351 FLIPWTAINLVDYYFIRRGKYHVKSMFDVNGQYGRVNWITAAAFVLSIIL 400
BSNT_05923___ 401 EIPFINTSFYIGPLAKMFGGGDIAWIIGLAVPSVLYYVLMKPRLKKRAGY 450
|||||||||||||||::||||||||:|||||||:|||||||.|:|
RBAM_035960__ 401 EIPFINTSFYIGPLAEIFGGGDIAWVIGLAVPSLLYYVLMKSRVK----- 445
BSNT_05923___ 451 QEKLSSL 457
|::..||
RBAM_035960__ 446 QQEAPSL 452
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