Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06064 and RBAM_035950

See DNA alignment / Visit BSNT_06064 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:33
# Commandline: needle
#    -asequence pep-align/BSNT_06064___yxeI.1.9828.seq
#    -bsequence pep-align/RBAM_035950___yxeI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06064___yxeI-RBAM_035950___yxeI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06064___yxeI-RBAM_035950___yxeI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06064___yxeI
# 2: RBAM_035950___yxeI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 328
# Identity:     254/328 (77.4%)
# Similarity:   287/328 (87.5%)
# Gaps:           0/328 ( 0.0%)
# Score: 1379.0
# 
#
#=======================================

BSNT_06064___      1 MCTSLTLETADRNHLLARTMDFAFQLGTEVILYPRRYSWKSEADGKAHQT     50
                     |||||||:|.|.||||||||||||||||:|:||||:|||||||||:.|:|
RBAM_035950__      1 MCTSLTLKTTDGNHLLARTMDFAFQLGTDVVLYPRQYSWKSEADGRMHRT     50

BSNT_06064___     51 QYAFIGMGRKLGNILFADGVNENGLSCAALYFPGYAEYEKTIREDTVHIA    100
                     :||||||||.|||:||||||||.|||||.|||||:|.|||..||.|.|||
RBAM_035950__     51 KYAFIGMGRNLGNVLFADGVNEKGLSCATLYFPGFAGYEKAEREGTCHIA    100

BSNT_06064___    101 PHEFVTWVLSVCQSLEDVKEKIRSLTIVEKKLDLLDTVLPLHWILSDRTG    150
                     |||||||.||.|:||||:|||:..||||||||.|||||||||||||||||
RBAM_035950__    101 PHEFVTWALSNCESLEDIKEKLSMLTIVEKKLMLLDTVLPLHWILSDRTG    150

BSNT_06064___    151 RSLTIEPRADGLKVYDNQPGVMTNSPDFIWHVTNLQQYTGIRPKQLESKE    200
                     ..:.|||..:|:|||||:||||||||:|.||||||:.|.||||:|.|||.
RBAM_035950__    151 GCIVIEPTPEGMKVYDNKPGVMTNSPEFPWHVTNLRHYIGIRPQQSESKT    200

BSNT_06064___    201 MGGLALSAFGQGLGTVGLPGDYTPPSRFVRAVYLKEHLEPAADETKGVTA    250
                     :||:.|:|||||.||:||||||||||||:||.||||||||||.||.||||
RBAM_035950__    201 LGGMTLTAFGQGSGTIGLPGDYTPPSRFIRAAYLKEHLEPAAHETDGVTA    250

BSNT_06064___    251 AFQILANMTIPKGAVITEEDEIHYTQYTSVMCNETGNYYFHHYDNRQIQK    300
                     ||.:|:|:.||||||||||:||.|||||||||.:|||||||.||||||.|
RBAM_035950__    251 AFHVLSNVNIPKGAVITEENEIDYTQYTSVMCCDTGNYYFHLYDNRQIHK    300

BSNT_06064___    301 VNLFHEDLDCLEPKVFSAKAEESILELN    328
                     |:|||||||..|||||:|.||::|.|||
RBAM_035950__    301 VSLFHEDLDRPEPKVFAAAAEQNIQELN    328


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