Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06064 and RBAM_035950

See Amino acid alignment / Visit BSNT_06064 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:33
# Commandline: needle
#    -asequence dna-align/BSNT_06064___yxeI.1.9828.seq
#    -bsequence dna-align/RBAM_035950___yxeI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06064___yxeI-RBAM_035950___yxeI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06064___yxeI-RBAM_035950___yxeI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06064___yxeI
# 2: RBAM_035950___yxeI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 993
# Identity:     747/993 (75.2%)
# Similarity:   747/993 (75.2%)
# Gaps:          12/993 ( 1.2%)
# Score: 2688.5
# 
#
#=======================================

BSNT_06064___      1 ATGTGCACAAGTCTTACATTGGAAACTGCTGACCGGAATCATTTATTAGC     50
                     |||||.|||||||||||||||.||||..|.|||.|.|||||..||||.||
RBAM_035950__      1 ATGTGTACAAGTCTTACATTGAAAACGACAGACGGTAATCACCTATTGGC     50

BSNT_06064___     51 GAGAACAATGGATTTTGCATTTCAGCTGGGGACGGAGGTCATTCTCTATC    100
                     |.||||.||||||||||||||||||||.||||||||.|||.|.||.||.|
RBAM_035950__     51 GCGAACGATGGATTTTGCATTTCAGCTCGGGACGGACGTCGTGCTTTACC    100

BSNT_06064___    101 CGCGCCGTTACAGTTGGAAGAGTGAAGCTGACGGAAAGGCCCATCAGACA    150
                     |.||.|..|||||.|||||.||.|||||||||||.|.|...|||..|||.
RBAM_035950__    101 CTCGTCAGTACAGCTGGAAAAGCGAAGCTGACGGCAGGATGCATAGGACG    150

BSNT_06064___    151 CAGTACGCGTTTATCGGTATGGGAAGAAAACTTGGTAATATTTTATTTGC    200
                     .|.|||||.||||||||.|||||.|||||.||.||.|||.||.|.|||||
RBAM_035950__    151 AAATACGCATTTATCGGCATGGGGAGAAATCTCGGCAATGTTCTGTTTGC    200

BSNT_06064___    201 AGACGGCGTTAATGAAAACGGTTTATCGTGTGCTGCGCTTTATTTTCCGG    250
                     .||||||||.||||||||.||..|.||||||||..||||.||||||||||
RBAM_035950__    201 CGACGGCGTAAATGAAAAAGGGCTGTCGTGTGCGACGCTGTATTTTCCGG    250

BSNT_06064___    251 GCTATGCGGAGTACGAAAAAACGATACGGGAAGATACCGTTCACATTGCC    300
                     |||.|||||..|||||.|||.||..||||||.|..|||..||||||.||.
RBAM_035950__    251 GCTTTGCGGGATACGAGAAAGCGGAACGGGAGGGCACCTGTCACATCGCT    300

BSNT_06064___    301 CCGCATGAGTTTGTGACATGGGTGCTGTCAGTCTGTCAGTCTTTGGAAGA    350
                     ||.|||||||||||.||.||||...|.|||..||||.|.|||.|.|||||
RBAM_035950__    301 CCTCATGAGTTTGTCACCTGGGCCTTATCAAACTGTGAATCTCTTGAAGA    350

BSNT_06064___    351 CGTAAAAGAAAAGAT-TCGAT-CTTTAACGATTGTAGAGAAAAAATTAGA    398
                     |.||||.||||||.| ||.|| |  |.||||||||||||||.||.||| |
RBAM_035950__    351 CATAAAGGAAAAGCTCTCAATGC--TGACGATTGTAGAGAAGAAGTTA-A    397

BSNT_06064___    399 T-CTATTGGATACAGTTTTACCGCTTCACTGGATATTGTCAGACCGGACG    447
                     | .||||||||||.||..|.||.|||||.|||||.||.||||||||.|||
RBAM_035950__    398 TGTTATTGGATACGGTGCTGCCTCTTCATTGGATTTTATCAGACCGCACG    447

BSNT_06064___    448 GGCCGAAGC-CTGACGATAGAACCGAGAGCAGACGGCCTCAAAGTCTATG    496
                     |||.|..|| .||.| ||.||.||||.|.|.||.||..|.|||||.||||
RBAM_035950__    448 GGCGGCTGCATTGTC-ATCGAGCCGACACCGGAGGGAATGAAAGTATATG    496

BSNT_06064___    497 ATAATCAACCTGGTGTCATGACGAACAGCCCCGACTTTATATGGCATGTA    546
                     |.||..||||.||.||.|||||.|||||.||.||.|||...||||||||.
RBAM_035950__    497 ACAACAAACCCGGAGTGATGACCAACAGTCCGGAATTTCCTTGGCATGTG    546

BSNT_06064___    547 ACCAATCTGCAGCAATATACAGGAATCAGACCGAAGCAATTAGAGAGCAA    596
                     ||||||||||..||.||||..||||||||.|||.||||.|.|||.|||||
RBAM_035950__    547 ACCAATCTGCGCCATTATATCGGAATCAGGCCGCAGCAGTCAGAAAGCAA    596

BSNT_06064___    597 AGAGA-TGGGCGGATTAGCCCTT-TCCGCTTTTGGCCAAGGCTTAGGAAC    644
                     | |.| ||||||||.| |.|.|| .|||||||.||||||||.|..|||||
RBAM_035950__    597 A-ACATTGGGCGGAAT-GACATTAACCGCTTTCGGCCAAGGATCTGGAAC    644

BSNT_06064___    645 TGTTGGTCTGCCGGGGGATTATACACCGCCTTCCCGGTTTGTCAGAGCTG    694
                     ..|.||.||.||.||.|||||.||.|||||.|||||.||..|||||||.|
RBAM_035950__    645 GATCGGGCTTCCCGGTGATTACACGCCGCCATCCCGATTCATCAGAGCCG    694

BSNT_06064___    695 TTTATTTGAAAGAACATCTAGAGCCAGCGGCCGATGAAACGAAAGGTGTA    744
                     .||||.|||||||.|||.|||||||.||.||..||||||||.|.||.||.
RBAM_035950__    695 CTTATCTGAAAGAGCATTTAGAGCCTGCCGCTCATGAAACGGATGGCGTT    744

BSNT_06064___    745 ACGGCCGCTTTTCAAATTTTGGCAAATATGACGATACCAAAGGGCGCAGT    794
                     ||||||||||||||..|..||.|.|||.|||..||.|||||.|||||.||
RBAM_035950__    745 ACGGCCGCTTTTCACGTGCTGTCCAATGTGAATATTCCAAAAGGCGCGGT    794

BSNT_06064___    795 GATAACGGAAGAAGACGAAATTCATTATACGCAATATACTTCCGTGATGT    844
                     |||.||.||.||..|.||||||.||||||||||.|||||.||.||.||||
RBAM_035950__    795 GATCACAGAGGAGAATGAAATTGATTATACGCAGTATACGTCGGTCATGT    844

BSNT_06064___    845 GCAACGAAACTGGAAACTACTATTTCCACCACTATGACAATCGGCAAATC    894
                     ||...||.||.||.||||||||.||.||.|..||.|||||.|||||.||.
RBAM_035950__    845 GCTGTGACACCGGGAACTACTACTTTCATCTGTACGACAACCGGCAGATT    894

BSNT_06064___    895 CAAAAAGTAAATTTATTTCATGAAGACCTTGACTGTTTGGAGCCTAAAGT    944
                     ||.|||||||.||||||.||||||||.||||||.||..||||||.|||||
RBAM_035950__    895 CACAAAGTAAGTTTATTCCATGAAGATCTTGACCGTCCGGAGCCGAAAGT    944

BSNT_06064___    945 GTTTTCCGCTAAAGCAGAAGAGAGTATTCTAGAACTTAATTAA    987
                     .|||.|.||....||.||..|||.|||.|..||.||.|||||.
RBAM_035950__    945 ATTTGCGGCCGCGGCGGAGCAGAATATACAGGAGCTGAATTAG    987


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_06064 and RBAM_035950

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
