Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05911 and RBAM_035940
See
DNA alignment /
Visit
BSNT_05911 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:25
# Commandline: needle
# -asequence pep-align/BSNT_05911.1.9828.seq
# -bsequence pep-align/RBAM_035940___katX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05911-RBAM_035940___katX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05911-RBAM_035940___katX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05911
# 2: RBAM_035940___katX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 537
# Identity: 373/537 (69.5%)
# Similarity: 384/537 (71.5%)
# Gaps: 147/537 (27.4%)
# Score: 2029.0
#
#
#=======================================
BSNT_05911 0 -------------------------------------------------- 0
RBAM_035940__ 1 MENNKNSEETLSSKTTGKGESEDTLTNRQGHPVTDNQNVRTVGNRGPTTL 50
BSNT_05911 0 -------------------------------------------------- 0
RBAM_035940__ 51 ENYDFLEKISHFDRERIPERVVHARGAGAHGYFEAYGSFGDEEISTYTRA 100
BSNT_05911 1 -----------------------------------------------MVG 3
:||
RBAM_035940__ 101 KVFQKKGMKTPAFVRFSTVNHGKHSPETLRDPRGFAVKLYTEDGNWDLVG 150
BSNT_05911 4 NNLKIFFIRDPLKFPDLVHAFQPDPVTNIQDGERIFDFISQSPEATHMIT 53
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_035940__ 151 NNLKIFFIRDPLKFPDLVHAFQPDPVTNIQDGERIFDFISQSPEATHMIT 200
BSNT_05911 54 FLFSPWGIPANYRQMQGSGVHAYKWVNEEGKAVLVKYHFEPKQGIRNLTQ 103
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_035940__ 201 FLFSPWGIPANYRQMQGSGVHAYKWVNEEGKAVLVKYHFEPKQGIRNLTQ 250
BSNT_05911 104 KEAEEIQGKNFNHATQDLYDAIENGDYPEWEVYAQIMSDDEHPELDFDPL 153
|||||||||||||||||||:|||.|||||||||||||:||||||||||||
RBAM_035940__ 251 KEAEEIQGKNFNHATQDLYEAIEKGDYPEWEVYAQIMTDDEHPELDFDPL 300
BSNT_05911 154 DPTKLWYKDDFPWKPIGKLVLNKNPENYHAEVEQASFGTGVLVDGLDFSD 203
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_035940__ 301 DPTKLWYKDDFPWKPIGKLVLNKNPENYHAEVEQASFGTGVLVDGLDFSD 350
BSNT_05911 204 DKLLQGRTFAYSDTQRYRVGANYLQLPINSPKKHVATNQEGGQMQYRVDR 253
|||||||||:||||||||||||||||||||||||||||||||||||||||
RBAM_035940__ 351 DKLLQGRTFSYSDTQRYRVGANYLQLPINSPKKHVATNQEGGQMQYRVDR 400
BSNT_05911 254 AEGQNPHVNYEPSIMGGLKEAKQDGKDHTPHVEGDVKREAIDRTNNFGQA 303
||||||||||||||||||.|||||||||||||||||.||||||:||||||
RBAM_035940__ 401 AEGQNPHVNYEPSIMGGLNEAKQDGKDHTPHVEGDVMREAIDRSNNFGQA 450
BSNT_05911 304 GETYRRFTEFERNELITNLVNTLSTCRKEIQDQMIENFTKADPDYGKRVA 353
|||||||:||||||||||||||||:|||:|||||||||||||||||||||
RBAM_035940__ 451 GETYRRFSEFERNELITNLVNTLSSCRKDIQDQMIENFTKADPDYGKRVA 500
BSNT_05911 354 EGLKKVSENNSNGPIGTTETEQAAKQAEQESHPSDPY 390
|||||.:|:||.||||||:|.||||||||||||||||
RBAM_035940__ 501 EGLKKAAESNSGGPIGTTDTAQAAKQAEQESHPSDPY 537
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.