Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01007 and RBAM_035900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:41
# Commandline: needle
# -asequence pep-align/BSNT_01007___ydhP.1.9828.seq
# -bsequence pep-align/RBAM_035900___ydhP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01007___ydhP-RBAM_035900___ydhP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01007___ydhP-RBAM_035900___ydhP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01007___ydhP
# 2: RBAM_035900___ydhP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 468
# Identity: 381/468 (81.4%)
# Similarity: 429/468 (91.7%)
# Gaps: 5/468 ( 1.1%)
# Score: 2157.0
#
#
#=======================================
BSNT_01007___ 1 MAQTE---QYRFPKDFWWGSSASATQTEGAADRDGKGQNIWDYWFEKEPH 47
.|| |||||:.|||||||||||||||||||||.|||||||:||||.
RBAM_035900__ 1 --MTESNIQYRFPEGFWWGSSASATQTEGAADRDGKSQNIWDYWYEKEPS 48
BSNT_01007___ 48 RFFDHVGPADTSQFYDNYKEDIRLMKELGHNSFRMSISWSRLIPNGTGEI 97
|||:.|||.|||:|||.||||||||||:||||||:|||||||||:||||:
RBAM_035900__ 49 RFFNGVGPGDTSRFYDQYKEDIRLMKEIGHNSFRLSISWSRLIPDGTGEV 98
BSNT_01007___ 98 NDKAANFYNNVIDELIANGIEPFVNLFHFDMPIALQKIGGWVNRETVDAY 147
|.||..||.:||||::|:.|||||||||||||:|||:.||||:|.||||:
RBAM_035900__ 99 NQKAVAFYQDVIDEMLAHHIEPFVNLFHFDMPLALQRKGGWVSRNTVDAF 148
BSNT_01007___ 148 ENYARTCFRLFGGRVKKWFTHNEPIVPVEGGYLYDFHYPNKVDFKEAVQV 197
|:||:|||.|||.:|||||||||||||:||||||||||||.|:|:||||.
RBAM_035900__ 149 EHYAKTCFSLFGDKVKKWFTHNEPIVPIEGGYLYDFHYPNHVNFQEAVQA 198
BSNT_01007___ 198 GFHTMLSSARAIQAYREMKQDGKIGIILNLTPSYPRSSHPADVKAGEIAD 247
||||:||:|||::||||:||||:|||||||||||||||||.||||..|||
RBAM_035900__ 199 GFHTLLSNARAVKAYRELKQDGQIGIILNLTPSYPRSSHPEDVKASRIAD 248
BSNT_01007___ 248 AFFNRSFLDPSVKGEFPKELVDILKHEGFMPDYNAEDLDIIKKNTVDLLG 297
||||||||||:||||||:|||:|||.|||:|.|..|||.:|:::||||||
RBAM_035900__ 249 AFFNRSFLDPAVKGEFPEELVEILKAEGFLPHYEKEDLRLIQEHTVDLLG 298
BSNT_01007___ 298 VNYYQPRRVKAKEHLPNPDAPFLPDRYFDPYVMPGRKMNPHRGWEIYEKG 347
||||||||||||||:|||.|||||:|:|||||||||||||||||||||||
RBAM_035900__ 299 VNYYQPRRVKAKEHVPNPHAPFLPERFFDPYVMPGRKMNPHRGWEIYEKG 348
BSNT_01007___ 348 VYDILINLKENYGNIECFISENGMGVEGEERFRDEQGIIQDDYRIEFIKE 397
:||||.||:|:||||||||||||||||||||||||.||||||||||||:|
RBAM_035900__ 349 IYDILTNLREHYGNIECFISENGMGVEGEERFRDENGIIQDDYRIEFIQE 398
BSNT_01007___ 398 HLKWIHRAIQEGSNVKGYHLWTFMDNWSWTNAYKNRYGFVSVNLEKDGER 447
||||:||||.|||||||||||||||||||||||||||||||||||..|||
RBAM_035900__ 399 HLKWVHRAIGEGSNVKGYHLWTFMDNWSWTNAYKNRYGFVSVNLENGGER 448
BSNT_01007___ 448 TVKKSGKWFKKVAEHSGF 465
||||||:|||.|::.:||
RBAM_035900__ 449 TVKKSGRWFKAVSDQNGF 466
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