Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01003 and RBAM_035890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:41
# Commandline: needle
# -asequence pep-align/BSNT_01003.1.9828.seq
# -bsequence pep-align/RBAM_035890___ydhO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01003-RBAM_035890___ydhO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01003-RBAM_035890___ydhO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01003
# 2: RBAM_035890___ydhO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 439
# Identity: 234/439 (53.3%)
# Similarity: 248/439 (56.5%)
# Gaps: 179/439 (40.8%)
# Score: 1194.0
#
#
#=======================================
BSNT_01003 1 MFEKISQFLVPIAGRLNNNRYLQVLRDAFMLAFPLTIFGSIFVVLTNLPF 50
||||||||||||||:|||||||||||||||||||||||||:|||||||||
RBAM_035890__ 1 MFEKISQFLVPIAGKLNNNRYLQVLRDAFMLAFPLTIFGSVFVVLTNLPF 50
BSNT_01003 51 LNKIMNASMLTSFQSHFGIASTATMGIMSVFVVFGIGYYLSKSYQVEAVF 100
|||||::|.|:.|||.||.||||||||||:||||||||||||||:|||||
RBAM_035890__ 51 LNKIMSSSALSVFQSGFGGASTATMGIMSIFVVFGIGYYLSKSYEVEAVF 100
BSNT_01003 101 GGAIALVSFLLLTPFIVQPETGDAVTGVIPVDRLGAKGMFLGMITAFLSG 150
|||||||||||||||:::||||.||.|||||||||||||||||:||||||
RBAM_035890__ 101 GGAIALVSFLLLTPFVLEPETGKAVAGVIPVDRLGAKGMFLGMMTAFLSG 150
BSNT_01003 151 EIYRRIVQKNLTIKMPAGVPPAVAKSFAALIPAFITLTVFLLINVMVTLF 200
||||||||:|||||||||||||||||||||||||||||||||||..||..
RBAM_035890__ 151 EIYRRIVQRNLTIKMPAGVPPAVAKSFAALIPAFITLTVFLLINAAVTQI 200
BSNT_01003 201 FKTNMHDVIYHAIQAPLVGLGSGIIPTLIAVFFIQILWFFGLHGQIIINS 250
|.||:||||||.:|||||||||||||||||||||||||||||||||||||
RBAM_035890__ 201 FHTNLHDVIYHTVQAPLVGLGSGIIPTLIAVFFIQILWFFGLHGQIIINS 250
BSNT_01003 251 VMDPIWNTLQ---------------------------------------- 260
||||||||||
RBAM_035890__ 251 VMDPIWNTLQVENLAAYTAGKEIPHIISKPFMEIYTVGMGGTGMTLAIVI 300
BSNT_01003 260 -------------------------------------------------- 260
RBAM_035890__ 301 AILLFMKSKQMKQISKLGLAPGIFNVNEPVIFGLPIVMNPIIIIPWVIAP 350
BSNT_01003 260 -------------------------------------------------- 260
RBAM_035890__ 351 MVVTLVTYLAMSAGIVPPPTGVTVPWTVPLFINGIMATNSVMGGIMQLVN 400
BSNT_01003 260 --------------------------------------- 260
RBAM_035890__ 401 LCIVFVIWFPFLKALDKLNMAKEKEAETEQHARDDSMSM 439
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