Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00917 and RBAM_035860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:37
# Commandline: needle
# -asequence pep-align/BSNT_00917___ydfA.1.9828.seq
# -bsequence pep-align/RBAM_035860___ydfA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00917___ydfA-RBAM_035860___ydfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00917___ydfA-RBAM_035860___ydfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00917___ydfA
# 2: RBAM_035860___ydfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 435
# Identity: 341/435 (78.4%)
# Similarity: 388/435 (89.2%)
# Gaps: 3/435 ( 0.7%)
# Score: 1760.0
#
#
#=======================================
BSNT_00917___ 1 MTSMILAVFIFLLTLVLVIWQPKNLSIGWSACGGAVLALIAGVVNFHDVL 50
|...:|:..||:||||.||||||::|||||||||||||||||.|:.||:.
RBAM_035860__ 1 MGVAVLSALIFVLTLVFVIWQPKHVSIGWSACGGAVLALIAGAVSLHDIA 50
BSNT_00917___ 51 TVTGIVWNATLAFVAIILISLILDNIGFFEWAALHMAKAAKGNGVRMFVY 100
.||||||||||||:|||:||||||:||||||||||||.||||:|:|||:|
RBAM_035860__ 51 EVTGIVWNATLAFIAIIIISLILDSIGFFEWAALHMAMAAKGSGLRMFLY 100
BSNT_00917___ 101 VSLLGAIVAALFANDGAALILTPIVLAMVRALHFNEKLVFPFIIASGFIA 150
||:|||:|:|||||||||||||||||||||||:..||||||||||.||||
RBAM_035860__ 101 VSVLGAVVSALFANDGAALILTPIVLAMVRALNLPEKLVFPFIIAGGFIA 150
BSNT_00917___ 151 DTTSLPLVVSNLVNIVSADYFHITFIDYASRMVVPYLFSLLASIIVLYLF 200
|||||||||||||||||||||||.:|:|||||:||.||||.|||:||||:
RBAM_035860__ 151 DTTSLPLVVSNLVNIVSADYFHIGYIEYASRMLVPNLFSLAASILVLYLY 200
BSNT_00917___ 201 FRKSIPKRYDLTEVKKPVEAIKDQNMFRLSWYILGLLLIGYFASEFFSIP 250
|||:||||:|...||.|..||||:.:|||||.:|.:||||||.|...|||
RBAM_035860__ 201 FRKNIPKRFDTGLVKHPASAIKDERLFRLSWGVLAVLLIGYFVSALLSIP 250
BSNT_00917___ 251 VSVVAGSIAIIFLIAAQKSPAVHTKKVVKEAPWAIVFFSIGMYVVVYGVR 300
||.||||||:||||.||:||||..|:|:|:|||||||||:||||||||:|
RBAM_035860__ 251 VSFVAGSIAVIFLILAQRSPAVPAKQVIKDAPWAIVFFSVGMYVVVYGLR 300
BSNT_00917___ 301 NAGLTDVLSDVIQAAADQGLFAGTIGMGFIAAILSSIMNNLPTVMIDALA 350
||||||:||.:||.|||.||||||:|||||||||||:|||||||||||:|
RBAM_035860__ 301 NAGLTDLLSQLIQKAADHGLFAGTLGMGFIAAILSSVMNNLPTVMIDAIA 350
BSNT_00917___ 351 IAGTDTHGMMREALIYANVIGSDLGPKITPIGSLATLLWLHVLSHKGMKI 400
|:||.|||:|||||||||||||||||||||||||||||||||||.|.:||
RBAM_035860__ 351 ISGTGTHGLMREALIYANVIGSDLGPKITPIGSLATLLWLHVLSRKNVKI 400
BSNT_00917___ 401 SWGTYFKTGIILTIPTLLITLVGLYIWLLIIHSCF 435
|||.|||||:|||||||.|||:|||:|||.:.
RBAM_035860__ 401 SWGMYFKTGLILTIPTLFITLIGLYLWLLWLA--- 432
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