Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05909 and RBAM_035810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:25
# Commandline: needle
# -asequence pep-align/BSNT_05909___yxlJ.1.9828.seq
# -bsequence pep-align/RBAM_035810___yxlJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05909___yxlJ-RBAM_035810___yxlJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05909___yxlJ-RBAM_035810___yxlJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05909___yxlJ
# 2: RBAM_035810___yxlJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 196
# Identity: 161/196 (82.1%)
# Similarity: 174/196 (88.8%)
# Gaps: 0/196 ( 0.0%)
# Score: 867.0
#
#
#=======================================
BSNT_05909___ 1 MTREKNPLPITFYQKTALELAPSLLGCLLVKETDEGTASGYIVETEAYMG 50
|..|..||||.|||:.::||||.|||||||||||||||||:|||||||||
RBAM_035810__ 1 MAGEGKPLPIEFYQRPSVELAPLLLGCLLVKETDEGTASGFIVETEAYMG 50
BSNT_05909___ 51 AGDRAAHSFNNRRTKRTEIMFAEAGRVYTYVMHTHTLLNVVAAEEDVPQA 100
|.|||||||.|||||||||||.||||:||||||||||:|||||:..:|||
RBAM_035810__ 51 AEDRAAHSFGNRRTKRTEIMFHEAGRIYTYVMHTHTLMNVVAADIGIPQA 100
BSNT_05909___ 101 VLIRAIEPHEGQLLMEERRPGRSPREWTNGPGKLTKALGVTMNDYGRWIT 150
|||||.||||||.|||.|||||.||||||||||||||:|::|||||..||
RBAM_035810__ 101 VLIRAAEPHEGQFLMESRRPGRHPREWTNGPGKLTKAMGISMNDYGGMIT 150
BSNT_05909___ 151 EQPLYIESGYTPEAISTGPRIGIDNSGEARDYPWRFWVTGNRYVSR 196
|.||||..|:|||.|||||||||||||||||||||:||||||||||
RBAM_035810__ 151 EPPLYITEGFTPEHISTGPRIGIDNSGEARDYPWRYWVTGNRYVSR 196
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