Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05898 and RBAM_035750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:25
# Commandline: needle
# -asequence pep-align/BSNT_05898___ywaA.1.9828.seq
# -bsequence pep-align/RBAM_035750___ywaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05898___ywaA-RBAM_035750___ywaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05898___ywaA-RBAM_035750___ywaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05898___ywaA
# 2: RBAM_035750___ywaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 321/363 (88.4%)
# Similarity: 339/363 (93.4%)
# Gaps: 1/363 ( 0.3%)
# Score: 1669.0
#
#
#=======================================
BSNT_05898___ 1 MTKQTIRVELTSTKKPKPDPNQLSFGRVFTDHMFVMDYAADKGWYDPRII 50
.||.||||.||.|||||||:.|:|||:||||||||||.||:||||||||
RBAM_035750__ 1 -MKQDIRVEFTSAKKPKPDPHDLAFGRIFTDHMFVMDYDADQGWYDPRII 49
BSNT_05898___ 51 PYQPLSMDPAAMVYHYGQTVFEGLKAYVSEDDHVLLFRPEKNMERLNQSN 100
|||.:|||||||||||||||||||||||::|..|||||||||||||||||
RBAM_035750__ 50 PYQSISMDPAAMVYHYGQTVFEGLKAYVTKDQEVLLFRPEKNMERLNQSN 99
BSNT_05898___ 101 DRLCIPQIDEEQVLEGLKQLVAIDKDWIPNAEGTSLYIRPFIIATEPFLG 150
||||||.||||.|||||||||||||||||.||||||||||||||||||||
RBAM_035750__ 100 DRLCIPLIDEELVLEGLKQLVAIDKDWIPKAEGTSLYIRPFIIATEPFLG 149
BSNT_05898___ 151 VAASHTYKLLIILSPVGSYYKEGIKPVKIAVESEFVRAVKGGTGNAKTAG 200
|||||||||.||||||||||||||||||||||:|||||||||||||||||
RBAM_035750__ 150 VAASHTYKLFIILSPVGSYYKEGIKPVKIAVENEFVRAVKGGTGNAKTAG 199
BSNT_05898___ 201 NYASSLKAQQVAEEKGFSQVLWLDGIEKKYIEEVGSMNIFFKINGEIVTP 250
|||||||||||||||||||||||||||||||||||||||||||:||||||
RBAM_035750__ 200 NYASSLKAQQVAEEKGFSQVLWLDGIEKKYIEEVGSMNIFFKISGEIVTP 249
BSNT_05898___ 251 MLNGSILEGITRNSVIALLKHWGLQVSERKIAIDEVIQAHKDGILEEAFG 300
.|||||||||||||||.|||||||.||||||:|||:||||:||.|||.||
RBAM_035750__ 250 ELNGSILEGITRNSVITLLKHWGLTVSERKISIDEIIQAHRDGRLEETFG 299
BSNT_05898___ 301 TGTAAVISPVGELIWQDETLSINNGETGEIAKKLYDTITGIQKGAVADEF 350
|||||||||||||||.||:|.|.:||||||:||||||||||||||.||.|
RBAM_035750__ 300 TGTAAVISPVGELIWNDESLVIGSGETGEISKKLYDTITGIQKGAEADVF 349
BSNT_05898___ 351 GWTTEVAALTESK 363
|||||||:|:|:|
RBAM_035750__ 350 GWTTEVASLSETK 362
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