Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05895 and RBAM_035740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:24
# Commandline: needle
# -asequence pep-align/BSNT_05895___dltD.1.9828.seq
# -bsequence pep-align/RBAM_035740___dltD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05895___dltD-RBAM_035740___dltD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05895___dltD-RBAM_035740___dltD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05895___dltD
# 2: RBAM_035740___dltD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 392
# Identity: 306/392 (78.1%)
# Similarity: 346/392 (88.3%)
# Gaps: 0/392 ( 0.0%)
# Score: 1658.0
#
#
#=======================================
BSNT_05895___ 1 MKKRFFGPIILAFILFAGAIAIPSSWLTGFITDKRVKESATALNPSMFQG 50
|||||||||||||:||.||||:|:||||.||.:|||:|||.||||:||||
RBAM_035740__ 1 MKKRFFGPIILAFVLFVGAIAVPASWLTRFIPEKRVEESAAALNPNMFQG 50
BSNT_05895___ 51 LYLQDQMLKDPTYLPIYGSSELSRLDEFHPSNYFQVNNEGFTPYLVGKGG 100
||||::|.:|..||||:|||||||||||||||||||||:|||||||||||
RBAM_035740__ 51 LYLQNKMFEDSKYLPIFGSSELSRLDEFHPSNYFQVNNQGFTPYLVGKGG 100
BSNT_05895___ 101 SQSLIHSLNFAAHMDQLKGKKIVFIVSPQWFIKRGSDEQHFAPNYSALQG 150
.|||||::|||||..||||||:|||||||||||:||||||||||:|:||.
RBAM_035740__ 101 DQSLIHAVNFAAHYQQLKGKKLVFIVSPQWFIKKGSDEQHFAPNFSSLQA 150
BSNT_05895___ 151 LDLAFNDQIDPEIKKKMMKRMLRFKAVQNDAILSELYKAMVNGQTWKVNA 200
||||||:||||.:||.|||||||||.||:||:||||||.|||||:|||.|
RBAM_035740__ 151 LDLAFNNQIDPAVKKNMMKRMLRFKVVQHDAVLSELYKGMVNGQSWKVKA 200
BSNT_05895___ 201 LKPAAKVYYSMLEKKDLYYSTTESSGPKRYISQSVKDKSWSELNKLADQS 250
:.||||.|||:|||||||||..|:.||:|.||:::|.||||||...|.|.
RBAM_035740__ 201 VMPAAKAYYSLLEKKDLYYSMGENKGPERTISENLKGKSWSELKTAAAQL 250
BSNT_05895___ 251 GKRHSGSNDFHIDNPVYKKLKPKVPKLKGKNKGRSYAVSPEYGDFEMMLD 300
|:|.|.||.|:||:..|||:|.||.::||.||||:||.|.||.|||.|||
RBAM_035740__ 251 GERSSKSNPFYIDDASYKKIKKKVKRVKGINKGRTYAKSVEYHDFEDMLD 300
BSNT_05895___ 301 ILKDAGAEPMFVTIPVNGKWYDYTGFPKKGRTDYYKKVNKQIRAKGFQVA 350
||||||||||||.|||||||||||||||||||||||||.|||:|||||||
RBAM_035740__ 301 ILKDAGAEPMFVVIPVNGKWYDYTGFPKKGRTDYYKKVTKQIKAKGFQVA 350
BSNT_05895___ 351 DFSGHEYDPYFMKDTIHIGWKGWVYVDKAIDEFYKTGKVTSS 392
|.||||||||||||||||.||||||||||:::||||||||..
RBAM_035740__ 351 DLSGHEYDPYFMKDTIHIAWKGWVYVDKAMEQFYKTGKVTVH 392
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