Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05893 and RBAM_035730

See DNA alignment / Visit BSNT_05893 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:24
# Commandline: needle
#    -asequence pep-align/BSNT_05893___dltC.1.9828.seq
#    -bsequence pep-align/RBAM_035730___dltC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05893___dltC-RBAM_035730___dltC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05893___dltC-RBAM_035730___dltC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05893___dltC
# 2: RBAM_035730___dltC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 78
# Identity:      69/78 (88.5%)
# Similarity:    74/78 (94.9%)
# Gaps:           0/78 ( 0.0%)
# Score: 358.0
# 
#
#=======================================

BSNT_05893___      1 MDFKQEVLDVLAEVCQDDIVKENPDIEIFEEGLLDSFGTVELLLAIENRF     50
                     |:||||||||||||||:|.||||||||||||||||||||||||:||||||
RBAM_035730__      1 MEFKQEVLDVLAEVCQEDAVKENPDIEIFEEGLLDSFGTVELLVAIENRF     50

BSNT_05893___     51 DILVPITEFDRDVWNTPNNIVNQLSELK     78
                     .|.|||||||||.|||||||||:|:|||
RBAM_035730__     51 GITVPITEFDRDEWNTPNNIVNKLTELK     78


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