Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05893 and RBAM_035730

See Amino acid alignment / Visit BSNT_05893 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:24
# Commandline: needle
#    -asequence dna-align/BSNT_05893___dltC.1.9828.seq
#    -bsequence dna-align/RBAM_035730___dltC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05893___dltC-RBAM_035730___dltC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05893___dltC-RBAM_035730___dltC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05893___dltC
# 2: RBAM_035730___dltC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity:     197/237 (83.1%)
# Similarity:   197/237 (83.1%)
# Gaps:           0/237 ( 0.0%)
# Score: 825.0
# 
#
#=======================================

BSNT_05893___      1 ATGGATTTTAAACAAGAGGTATTAGACGTTTTAGCAGAGGTTTGCCAGGA     50
                     |||||.||||||||.||.|||||||||||.|||||.||.|||||.|||||
RBAM_035730__      1 ATGGAATTTAAACAGGAAGTATTAGACGTATTAGCTGAAGTTTGTCAGGA     50

BSNT_05893___     51 TGACATCGTAAAGGAAAATCCTGATATTGAAATTTTTGAAGAAGGTTTGC    100
                     .|||...||.||.||||||||||||||||||||.|||||||||||..|||
RBAM_035730__     51 GGACGCTGTGAAAGAAAATCCTGATATTGAAATCTTTGAAGAAGGACTGC    100

BSNT_05893___    101 TTGATTCTTTTGGAACAGTAGAATTGCTGCTTGCGATTGAAAACCGTTTT    150
                     ||||||||||.|||||.|||||..|||||.|.||.||.||||||||.||.
RBAM_035730__    101 TTGATTCTTTCGGAACTGTAGAGCTGCTGGTCGCCATCGAAAACCGCTTC    150

BSNT_05893___    151 GATATTTTAGTGCCGATCACTGAATTTGACCGGGACGTTTGGAATACACC    200
                     |..|||..||||||||||||||||||||||||.||||..||||||||.||
RBAM_035730__    151 GGCATTACAGTGCCGATCACTGAATTTGACCGTGACGAGTGGAATACGCC    200

BSNT_05893___    201 TAACAACATTGTAAATCAGCTGTCTGAGTTGAAATAA    237
                     .||||||||||||||..|.|||.||||||||||.|||
RBAM_035730__    201 AAACAACATTGTAAACAAACTGACTGAGTTGAAGTAA    237


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