Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05866 and RBAM_035640

See DNA alignment / Visit BSNT_05866 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:23
# Commandline: needle
#    -asequence pep-align/BSNT_05866___ywbC.1.9828.seq
#    -bsequence pep-align/RBAM_035640___ywbC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05866___ywbC-RBAM_035640___ywbC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05866___ywbC-RBAM_035640___ywbC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05866___ywbC
# 2: RBAM_035640___ywbC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 127
# Identity:     107/127 (84.3%)
# Similarity:   117/127 (92.1%)
# Gaps:           1/127 ( 0.8%)
# Score: 577.0
# 
#
#=======================================

BSNT_05866___      1 -MAKRIDHTGIMVRDINASITFYEEVLGMKLKDRITHTNGVIELAFLGFE     49
                      .|||||||||||:||..||.||::||||:||||||||||:||||||||:
RBAM_035640__      1 MTAKRIDHTGIMVKDIETSIAFYQDVLGMQLKDRITHTNGIIELAFLGFQ     50

BSNT_05866___     50 DGPETEIELIQGYSSELPAEGKVHHIALLTDDIAAEYTKAKKMNAKFIDE     99
                     :||||||||||||||||||||||||.||||:|||||:|.||:..|.||||
RBAM_035640__     51 EGPETEIELIQGYSSELPAEGKVHHFALLTEDIAAEFTHAKRQGAVFIDE    100

BSNT_05866___    100 EITTLPNGYRYFYIEGPDGEWIEFFQR    126
                     |||||||||||||||||||||||||||
RBAM_035640__    101 EITTLPNGYRYFYIEGPDGEWIEFFQR    127


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